scaffold1445-EXSNAP2012.1 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold1445-EXSNAP2012.1 T336897_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.508 0.609
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1445-EXSNAP2012.1 Sox 135 205

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
pop-1 Caenorhabditis elegans WBGene00004077 D 0.508
HCOI00182800 Haemonchus contortus HCOI00182800 I 0.531
NECAME_05160 Necator americanus NECAME_05160 I 0.531
nLs.2.1.2.g07746 Litomosoides sigmodontis nLs.2.1.2.g07746 I 0.518
nOo.2.0.1.g05333 Onchocerca ochengi nOo.2.0.1.g05333 I 0.518
nRc.2.0.1.g16011 Romanomermis culicivorax nRc.2.0.1.g16011 I 0.432
PTRK_0001545900 Parastrongyloides trichosuri PTRK_0001545900 I 0.440
PXEA_0000093301 Protopolystoma xenopodis PXEA_0000093301 I 0.444
PXEA_0001732701 Protopolystoma xenopodis PXEA_0001732701 I 0.444
PXEA_0003152301 Protopolystoma xenopodis PXEA_0003152301 I 0.444
RSKR_0000644900 Rhabditophanes kr3021 RSKR_0000644900 I 0.447
SBAD_0000746301 Soboliphyme baturini SBAD_0000746301 I 0.426
scaffold1445-EXSNAP2012.2 Pristionchus exspectatus scaffold1445-EXSNAP2012.2 I 0.586
SCUD_0000824101 Schistosoma curassoni SCUD_0000824101 I 0.431
nDi.2.2.2.g04579 Dirofilaria immitis nDi.2.2.2.g04579 I 0.518
NBR_0000604901 Nippostrongylus brasiliensis NBR_0000604901 I 0.531
HDID_0001020301 Hymenolepis diminuta HDID_0001020301 I 0.444
HmN_000273200 Hymenolepis microstoma HmN_000273200 I 0.444
HmN_000448500 Hymenolepis microstoma HmN_000448500 I 0.444
HmN_000682900 Hymenolepis microstoma HmN_000682900 I 0.422
HNAJ_0001324301 Hymenolepis nana HNAJ_0001324301 I 0.444
HPLM_0000349201 Haemonchus placei HPLM_0000349201 I 0.531
L596_g19706 Steinernema carpocapsae L596_g19706 I 0.468
L889_g18974 Steinernema feltiae L889_g18974 I 0.455
L892_g30963 Steinernema scapterisci L892_g30963 I 0.468
L893_g30363 Steinernema glaseri L893_g30363 I 0.468
L898_g18866 Steinernema monticolum L898_g18866 I 0.455
MCOS_0000930001 Mesocestoides corti MCOS_0000930001 I 0.444
nAv.1.0.1.g00625 Acanthocheilonema viteae nAv.1.0.1.g00625 I 0.518
SMRZ_0000877601 Schistosoma margrebowiei SMRZ_0000877601 I 0.431
SMRZ_0001315801 Schistosoma margrebowiei SMRZ_0001315801 I 0.444
TASK_0000637001 Taenia asiatica TASK_0000637001 I 0.444
TCLT_0000616401 Thelazia callipaeda TCLT_0000616401 I 0.518
TCNE_0001771701 Toxocara canis TCNE_0001771701 I 0.472
TELCIR_21985 Teladorsagia circumcincta TELCIR_21985 I 0.531
TRE_0000445001 Trichobilharzia regenti TRE_0000445001 I 0.431
TRE_0001594201 Trichobilharzia regenti TRE_0001594201 I 0.444
TsM_000369100 Taenia solium TsM_000369100 I 0.444
TsM_001099200 Taenia solium TsM_001099200 I 0.444
TsM_001136700 Taenia solium TsM_001136700 I 0.422
TTAC_0000089501 Hydatigera taeniaeformis TTAC_0000089501 I 0.444
TTAC_0000904301 Hydatigera taeniaeformis TTAC_0000904301 I 0.444
TTAC_0001070201 Hydatigera taeniaeformis TTAC_0001070201 I 0.422
TASK_0000085101 Taenia asiatica TASK_0000085101 I 0.444
T265_05265 Opisthorchis viverrini T265_05265 I 0.444
T265_02639 Opisthorchis viverrini T265_02639 I 0.444
SMRZ_0001391701 Schistosoma margrebowiei SMRZ_0001391701 I 0.444
SMTD_0001130701 Schistosoma mattheei SMTD_0001130701 I 0.444
SMTD_0001817301 Schistosoma mattheei SMTD_0001817301 I 0.431
SMUV_0000161001 Syphacia muris SMUV_0000161001 I 0.502
SMUV_0000664701 Syphacia muris SMUV_0000664701 I 0.502
SPAL_0000777400 Strongyloides papillosus SPAL_0000777400 I 0.440
SPER_0003790901 Spirometra erinaceieuropaei SPER_0003790901 I 0.444
SROB_0000446201 Schistosoma rodhaini SROB_0000446201 I 0.431
SSLN_0001416001 Schistocephalus solidus SSLN_0001416001 I 0.444
SSLN_0001818401 Schistocephalus solidus SSLN_0001818401 I 0.444
SSTP_0000252100 Strongyloides stercoralis SSTP_0000252100 I 0.440
SVE_0421400 Strongyloides venezuelensis SVE_0421400 I 0.440
TTRE_0000080301 Trichuris trichiura TTRE_0000080301 I 0.423
EVEC_0000710101 Enterobius vermicularis EVEC_0000710101 I 0.502
WUBG_00857 Wuchereria bancrofti WUBG_00857 I 0.518
ENSPFOG00000023950 Poecilia formosa ENSPFOG00000023950 I 0.447
ENSTNIG00000005814 Tetraodon nigroviridis ENSTNIG00000005814 I 0.417
ENSXMAG00000005211 Xiphophorus maculatus ENSXMAG00000005211 I 0.457
HelroG107147 Helobdella robusta HelroG107147 I 0.446
HelroG135970 Helobdella robusta HelroG135970 I 0.434
LOAG_17858 Loa loa LOAG_17858 I 0.518
PPA09737 Pristionchus pacificus PPA09737 I 0.586
PPA09738 Pristionchus pacificus PPA09738 I 0.741
Smp_131260 Schistosoma mansoni Smp_131260 I 0.431
Smp_148190 Schistosoma mansoni Smp_148190 I 0.431
WBGene00238322 Onchocerca volvulus WBGene00238322 I 0.518
Ocbimv22023772m.g Octopus bimaculoides Ocbimv22023772m.g I 0.444
ENSPFOG00000022291 Poecilia formosa ENSPFOG00000022291 I 0.440
EFV61222 Trichinella spiralis EFV61222 I 0.423
CRE01231 Caenorhabditis remanei CRE01231 I 0.511
Aqu1.229819 Amphimedon queenslandica Aqu1.229819 I 0.444
Bm6269 Brugia malayi Bm6269 I 0.518
CapteG103591 Capitella teleta CapteG103591 I 0.444
CBG04236 Caenorhabditis briggsae CBG04236 I 0.459
CBG10974 Caenorhabditis briggsae CBG10974 I 0.482
CBG11789 Caenorhabditis briggsae CBG11789 I 0.442
CBN07368 Caenorhabditis brenneri CBN07368 I 0.511
CBN13162 Caenorhabditis brenneri CBN13162 I 0.511
CBN28577 Caenorhabditis brenneri CBN28577 I 0.511
CGI_10027723 Crassostrea gigas CGI_10027723 I 0.444
CJA17392 Caenorhabditis japonica CJA17392 I 0.538
CJA33358 Caenorhabditis japonica CJA33358 I 0.538
Sjc_0088020 Schistosoma japonicum Sjc_0088020 I 0.431
SMU15001097 Schmidtea mediterranea SMU15001097 I 0.422
D915_04767 Fasciola hepatica D915_04767 I 0.428
D915_11804 Fasciola hepatica D915_11804 I 0.431
D917_02294 Trichinella nativa D917_02294 I 0.423
D918_07819 Trichuris suis D918_07819 I 0.423
DICVIV_03179 Dictyocaulus viviparus DICVIV_03179 I 0.531
ECANG7_01705 Echinococcus canadensis ECANG7_01705 I 0.444
ECANG7_04138 Echinococcus canadensis ECANG7_04138 I 0.444
ECANG7_07082 Echinococcus canadensis ECANG7_07082 I 0.422
ECPE_0001492401 Echinostoma caproni ECPE_0001492401 I 0.456
ECPE_0001553401 Echinostoma caproni ECPE_0001553401 I 0.431
EEL_0000603701 Elaeophora elaphi EEL_0000603701 I 0.518
EmuJ_000067900 Echinococcus multilocularis EmuJ_000067900 I 0.444
D915_00291 Fasciola hepatica D915_00291 I 0.444
csin111647 Clonorchis sinensis csin111647 I 0.444
csin109327 Clonorchis sinensis csin109327 I 0.444
SMU15005587 Schmidtea mediterranea SMU15005587 I 0.422
SMU15009386 Schmidtea mediterranea SMU15009386 I 0.431
SMU15015111 Schmidtea mediterranea SMU15015111 I 0.444
SMU15019689 Schmidtea mediterranea SMU15019689 I 0.422
SMU15027530 Schmidtea mediterranea SMU15027530 I 0.444
SMU15036961 Schmidtea mediterranea SMU15036961 I 0.444
A_02446 Schistosoma haematobium A_02446 I 0.444
A_05769 Schistosoma haematobium A_05769 I 0.431
ACAC_0000989201 Angiostrongylus cantonensis ACAC_0000989201 I 0.531
ANCCEY_03081 Ancylostoma ceylanicum ANCCEY_03081 I 0.531
ASU_03617 Ascaris suum ASU_03617 I 0.472
BXY_1055900 Bursaphelenchus xylophilus BXY_1055900 I 0.476
EmuJ_001128100 Echinococcus multilocularis EmuJ_001128100 I 0.422