scaffold237-EXSNAP2012.36 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold237-EXSNAP2012.36 T336903_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold237-EXSNAP2012.36 Sox 27 95

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH41216 Xenopus laevis AAH41216 N 0.436
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.426
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.577
ACEP21543 Atta cephalotes ACEP21543 N 0.435
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.532
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.577
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.577
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.577
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.577
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.532
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.532
ASU_02248 Ascaris suum ASU_02248 N 0.532
Bm7076 Brugia malayi Bm7076 N 0.557
CBG09815 Caenorhabditis briggsae CBG09815 N 0.541
CBN09141 Caenorhabditis brenneri CBN09141 N 0.503
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.435
CJA12494 Caenorhabditis japonica CJA12494 N 0.419
CRE25200 Caenorhabditis remanei CRE25200 N 0.503
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.427
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.564
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.557
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.430
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.427
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.430
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.433
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.427
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.427
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.427
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.577
GB50847 Apis mellifera GB50847 N 0.435
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.444
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.425
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.577
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.577
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.435
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.577
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.577
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.435
ISCW021016 Ixodes scapularis ISCW021016 N 0.416
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.451
L798_00593 Zootermopsis nevadensis L798_00593 N 0.435
L892_g30100 Steinernema scapterisci L892_g30100 N 0.451
L898_g375 Steinernema monticolum L898_g375 N 0.439
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.435
LOAG_01279 Loa loa LOAG_01279 N 0.557
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.442
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.518
Minc14081 Meloidogyne incognita Minc14081 N 0.442
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.557
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.563
NECAME_16117 Necator americanus NECAME_16117 N 0.577
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.429
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.557
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.557
NV11999 Nasonia vitripennis NV11999 N 0.437
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.577
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.577
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.557
PPA02543 Pristionchus pacificus PPA02543 N 0.741
PPA03165 Pristionchus pacificus PPA03165 N 0.482
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.442
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.416
scaffold606-EXSNAP2012.13 Pristionchus exspectatus scaffold606-EXSNAP2012.13 N 0.482
SMAR004982 Strigamia maritima SMAR004982 N 0.422
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.424
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.433
smarce1 Oryzias latipes ENSORLG00000018629 N 0.427
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.433
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.532
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.442
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.577
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.541
TC007745 Tribolium castaneum TC007745 N 0.435
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.557
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.577
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.557
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.557
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.435