CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold257-EXSNAP2012.9
(
Pristionchus exspectatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
scaffold257-EXSNAP2012.9
T336904_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold257-EXSNAP2012.9
Sox
126
190
RKKKRRAFEFYWEEMRGEYAKSHANLGHNERRAIAQAEWRNVTNRDRWQTMADEYNEKMIETKYK
scaffold257-EXSNAP2012.9
Sox
193
259
PKPPVTANAFFFRENHRVLRQENPGLRGCDVLAEIGKMWEKCEDKSRYIEMQNADRQRYETEMTAYR
scaffold257-EXSNAP2012.9
Sox
436
500
RKKKRRAFEFYWEEMRGDYAKTHSHMGHNERRAIAQQEWKNVTDRDKWQKMADDYNEKMLCDKYK
scaffold257-EXSNAP2012.9
Sox
503
569
PKPPVTANAFYFKEQHVLLRQQRPELKGGAVLSEISKMWEKCTDRQRWLDMQAEDRRRYETEMATYK
Links
Other
Sox
family TFs
Other
Pristionchus exspectatus
TFs
0 Related TFs
">No related TF found