SCUD_0000824101 (Schistosoma curassoni)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SCUD_0000824101 T336919_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf7
M00193_2.00
Mus musculus
HNHNNNNNN

NNNNNNDND
PBM
Badis et al.(2009)
Tcf7_0950
0.674 0.812
Tcf7
M03532_2.00
Mus musculus
AAASATCAAAGV

BCTTTGATSTTT
SELEX
Jolma et al.(2013)
Tcf7_1
0.674 0.812
TCF7
M05755_2.00
Homo sapiens
DSATCAAWS

SWTTGATSH
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1
0.674 0.812
TCF7
M05756_2.00
Homo sapiens
WCWKCGYCYCGWTGW

WCAWCGRGRCGMWGW
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2
0.674 0.812
TCF7
M05890_2.00
Homo sapiens
NNASATCAAASNN

NNSTTTGATSTNN
SMiLE-seq
Isakova et al.(2017)
TCF7
0.674 0.812
TCF7
M09386_2.00
Homo sapiens
NBBCTTTSAWSTBNBN

NVNVASWTSAAAGVVN
Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A
0.674 0.812
Tcf7
M09400_2.00
Mus musculus
VVRVADSAAARVVVNV

BNBBBYTTTSHTBYBB
Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A
0.674 0.812
TCF7
M11294_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5_01
0.674 0.812
TCF7
M11295_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5
0.674 0.812
TCF7
M05757_2.00
Homo sapiens
RSATCAAAS

STTTGATSY
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1
0.674 0.812
TCF7
M05758_2.00
Homo sapiens
WCAWCGRGRCGMWGW

WCWKCGYCYCGWTGW
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2
0.674 0.812
Tcf7l2
M00198_2.00
Mus musculus
NSWTCAAAVN

NBTTTGAWSN
PBM
Badis et al.(2009)
Tcf7l2_3461
0.649 0.797
Lef1
M00200_2.00
Mus musculus
NSWTCAAAVN

NBTTTGAWSN
PBM
Badis et al.(2009)
Lef1_3504
0.649 0.797
LEF1
M03511_2.00
Homo sapiens
NRAGATCAAAGRVWW

WWBYCTTTGATCTYN
SELEX
Jolma et al.(2013)
LEF1_1
0.649 0.797
LEF1
M05771_2.00
Homo sapiens
NSATCAAAS

STTTGATSN
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1
0.649 0.797
LEF1
M05772_2.00
Homo sapiens
WCATCGRGRCGCTGW

WCAGCGYCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2
0.649 0.797
LEF1
M05775_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1
0.649 0.797
LEF1
M05776_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2
0.649 0.797
LEF1
M05895_2.00
Homo sapiens
WTCAAAGNNN

NNNCTTTGAW
SMiLE-seq
Isakova et al.(2017)
LEF1
0.649 0.797
Tcf7l2
M02646_2.00
Mus musculus
SATCAAAGN

NCTTTGATS
SELEX
Hallikas et al.(2006)
Tcf4
0.649 0.797
TCF7L2
M08167_2.00
Homo sapiens
NVASWTCAAAGVVN

NBBCTTTGAWSTBN
ChIP-seq
Mathelier et al.(2014)
MA0523.1
0.649 0.797
TCF7L2
M09393_2.00
Homo sapiens
DGCAGSTGKS

SMCASCTGCH
Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C
0.649 0.797
LEF1
M09392_2.00
Homo sapiens
BSYTTTSWNNTBYH

DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A
0.649 0.797
TCF7L2
M09394_2.00
Homo sapiens
VVASWTCAAAGVV

BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A
0.649 0.797
Lef1
M09402_2.00
Mus musculus
BSYTTTSWNNTBYH

DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B
0.649 0.797
Tcf7l2
M09401_2.00
Mus musculus
VVASWTCAAAGVV

BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A
0.649 0.797
TCF7L2
M09638_2.00
Homo sapiens
CCTTTGAWST

ASWTCAAAGG
Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196
0.649 0.797
LEF1
M11311_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q2_01
0.649 0.797
LEF1
M11312_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q3
0.649 0.797
LEF1
M11313_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q4
0.649 0.797
LEF1
M11314_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5_01
0.649 0.797
LEF1
M11315_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5
0.649 0.797
TCF7L2
M11316_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_01
0.649 0.797
TCF7L2
M11317_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_02
0.649 0.797
TCF7L2
M11318_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5
0.649 0.797
TCF7L2
M11319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF7L2_06
0.649 0.797
LEF1
M05773_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1
0.649 0.797
LEF1
M05774_2.00
Homo sapiens
WCATCGRGGCGCTGW

WCAGCGCCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2
0.649 0.797
LEF1
M05777_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1
0.649 0.797
LEF1
M05778_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2
0.649 0.797
Tcf7l1
M00207_2.00
Mus musculus
NNNNWWDN

NHWWNNNN
PBM
Badis et al.(2009)
Tcf3_3787
0.648 0.768
TCF7L1
M03512_2.00
Homo sapiens
AAAGATCAAAGG

CCTTTGATCTTT
SELEX
Jolma et al.(2013)
TCF7L1_1
0.648 0.768
TCF7L1
M05779_2.00
Homo sapiens
RSATCAAAG

CTTTGATSY
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1
0.648 0.768
TCF7L1
M05780_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2
0.648 0.768
TCF7L1
M09395_2.00
Homo sapiens
NBBCTTTGAWSTB

VASWTCAAAGVVN
Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B
0.648 0.768
Tcf7l1
M09406_2.00
Mus musculus
BBCTTTGAWST

ASWTCAAAGVV
Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A
0.648 0.768
Tcf7l1
M09407_2.00
Mus musculus
NDGCAGSTGBB

VVCASCTGCHN
Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A
0.648 0.768
TCF7L1
M11320_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_01
0.648 0.768
TCF7L1
M11321_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6_01
0.648 0.768
TCF7L1
M11322_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6
0.648 0.768
TCF7L1
M05781_2.00
Homo sapiens
CTTTGATSY

RSATCAAAG
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1
0.648 0.768
TCF7L1
M05782_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2
0.648 0.768
pan
M06451_2.00
Drosophila melanogaster
DWYCAAAD

HTTTGRWH
B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432
0.636 0.768
pan
M08428_2.00
Drosophila melanogaster
WHNAAAVRNRSCGM

KCGSYNYBTTTNDW
ChIP-chip
Mathelier et al.(2014)
MA0237.2
0.636 0.768
pan
M11337_2.00
Drosophila melanogaster
AAGATCAAAGG

CCTTTGATCTT
Transfac
Matys et al.(2006)
I$TCF_1
0.636 0.768
pan
M11338_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TCF_Q6
0.636 0.768
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.568 0.551
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SCUD_0000824101-mRNA-1 Sox 363 431

Links

Other Sox family TFs
Other Schistosoma curassoni TFs

500 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000007243 Ailuropoda melanoleuca ENSAMEG00000007243 I 0.000
ENSAPLG00000007892 Anas platyrhynchos ENSAPLG00000007892 I 0.000
ZZZ3 Anolis carolinensis ENSACAG00000006005 I 0.000
Afo_R000910 Aptenodytes forsteri Afo_R000910 I 0.000
ENSAMXG00000019065 Astyanax mexicanus ENSAMXG00000019065 I 0.000
ENSBTAP00000041453-D1 Bos grunniens ENSBTAP00000041453-D1 I 0.000
ZZZ3 Bos taurus ENSBTAG00000017419 I 0.000
fgenesh2_pg.scaffold_163000011 Branchiostoma floridae fgenesh2_pg.scaffold_163000011 I 0.000
fgenesh2_pg.scaffold_163000017 Branchiostoma floridae fgenesh2_pg.scaffold_163000017 I 0.000
Brh_R007515 Buceros rhinoceros Brh_R007515 I 0.000
ZZZ3 Callithrix jacchus ENSCJAG00000006894 I 0.000
Aan_R000828 Calypte anna Aan_R000828 I 0.000
ZZZ3 Canis familiaris ENSCAFG00000020376 I 0.000
ENSCPOG00000003135 Cavia porcellus ENSCPOG00000003135 I 0.000
Cmyd_10007243 Chelonia mydas Cmyd_10007243 I 0.000
ENSCSAG00000001398 Chlorocebus sabaeus ENSCSAG00000001398 I 0.000
ZZZ3 Choloepus hoffmanni ENSCHOG00000007997 I 0.000
zzz3 Danio rerio ENSDARG00000077581 I 0.000
ENSDNOG00000000463 Dasypus novemcinctus ENSDNOG00000000463 I 0.000
Zzz3 Dipodomys ordii ENSDORG00000010114 I 0.000
ZZZ3 Echinops telfairi ENSETEG00000013187 I 0.000
ZZZ3 Equus caballus ENSECAG00000011430 I 0.000
ZZZ3 Felis catus ENSFCAG00000001415 I 0.000
ENSFALG00000005715 Ficedula albicollis ENSFALG00000005715 I 0.000
ENSGMOG00000003250 Gadus morhua ENSGMOG00000003250 I 0.000
ZZZ3 Gallus gallus ENSGALG00000008988 I 0.000
zzz3 Gasterosteus aculeatus ENSGACG00000016546 I 0.000
Gfo_R009151 Geospiza fortis Gfo_R009151 I 0.000
ZZZ3 Gorilla gorilla ENSGGOG00000009242 I 0.000
ZZZ3 Homo sapiens ENSG00000036549 D 0.000
ENSSTOG00000016454 Ictidomys tridecemlineatus ENSSTOG00000016454 I 0.000
ENSLACG00000009877 Latimeria chalumnae ENSLACG00000009877 I 0.000
ENSLOCG00000003656 Lepisosteus oculatus ENSLOCG00000003656 I 0.000
LotgiG187172 Lottia gigantea LotgiG187172 I 0.000
ZZZ3 Loxodonta africana ENSLAFG00000011398 I 0.000
ENSP00000359837 Macaca fascicularis ENSP00000359837 I 0.000
ENSMMUG00000020219 Macaca mulatta ENSMMUG00000020219 I 0.000
ENSMEUG00000007391 Macropus eugenii ENSMEUG00000007391 I 0.000
ZZZ3 Meleagris gallopavo ENSMGAG00000009582 I 0.000
ENSMODG00000010136 Monodelphis domestica ENSMODG00000010136 I 0.000
ENSMODG00000010367 Monodelphis domestica ENSMODG00000010367 I 0.000
ENSMODG00000024557 Monodelphis domestica ENSMODG00000024557 I 0.000
ENSMPUG00000010824 Mustela putorius furo ENSMPUG00000010824 I 0.000
Zzz3 Mus musculus ENSMUSG00000039068 I 0.000
Myotis_brandtii_ZZZ3_10032449 Myotis brandtii Myotis_brandtii_ZZZ3_10032449 I 0.000
ZZZ3 Myotis lucifugus ENSMLUG00000006175 I 0.000
ENSNLEG00000009672 Nomascus leucogenys ENSNLEG00000009672 I 0.000
ZZZ3 Ochotona princeps ENSOPRG00000013036 I 0.000
Ocbimv22013214m.g Octopus bimaculoides Ocbimv22013214m.g I 0.000
Ogr17321 Ophisaurus gracilis Ogr17321 I 0.000
ENSONIG00000018369 Oreochromis niloticus ENSONIG00000018369 I 0.000
ZZZ3 Ornithorhynchus anatinus ENSOANG00000015757 I 0.000
ZZZ3 Oryctolagus cuniculus ENSOCUG00000002167 I 0.000
zzz3 Oryzias latipes ENSORLG00000003342 I 0.000
ZZZ3 Otolemur garnettii ENSOGAG00000014210 I 0.000
ENSOARG00000013012 Ovis aries ENSOARG00000013012 I 0.000
ZZZ3 Pan troglodytes ENSPTRG00000000881 I 0.000
ENSPANG00000005101 Papio anubis ENSPANG00000005101 I 0.000
ENSPMAG00000000497 Petromyzon marinus ENSPMAG00000000497 I 0.000
ENSPFOG00000000834 Poecilia formosa ENSPFOG00000000834 I 0.000
Pvit_10393 Pogona vitticeps Pvit_10393 I 0.000
ENSPPYG00000001223 Pongo abelii ENSPPYG00000001223 I 0.000
ZZZ3 Procavia capensis ENSPCAG00000016692 I 0.000
ZZZ3 Pteropus vampyrus ENSPVAG00000017539 I 0.000
Zzz3 Rattus norvegicus ENSRNOG00000050321 I 0.000
Sakowv30043886m.g Saccoglossus kowalevskii Sakowv30043886m.g I 0.000
ENSSHAG00000002082 Sarcophilus harrisii ENSSHAG00000002082 I 0.000
ZZZ3 Sorex araneus ENSSARG00000004268 I 0.000
ZZZ3 Sus scrofa ENSSSCG00000003772 I 0.000
ZZZ3 Taeniopygia guttata ENSTGUG00000007000 I 0.000
zzz3 Takifugu rubripes ENSTRUG00000006240 I 0.000
ENSTSYG00000001826 Tarsius syrichta ENSTSYG00000001826 I 0.000
ENSTNIG00000006386 Tetraodon nigroviridis ENSTNIG00000006386 I 0.000
Tal_R004642 Tyto alba Tal_R004642 I 0.000
ZZZ3 Vicugna pacos ENSVPAG00000001421 I 0.000
XP_002939691 Xenopus tropicalis XP_002939691 I 0.000
zzz3 Xenopus tropicalis XB-GENE-993548 I 0.000
ENSXMAG00000016350 Xiphophorus maculatus ENSXMAG00000016350 I 0.000