SMUV_0000856901 (Syphacia muris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMUV_0000856901 T336969_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000856901-mRNA-1 Sox 573 639

Links

Other Sox family TFs
Other Syphacia muris TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.460
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.458
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.431
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.431
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.431
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.431
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.431
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.460
ASU_13985 Ascaris suum ASU_13985 N 0.460
Bm2524 Brugia malayi Bm2524 N 0.468
CBG04066 Caenorhabditis briggsae CBG04066 N 0.476
CBN25379 Caenorhabditis brenneri CBN25379 I 0.467
CJA19030 Caenorhabditis japonica CJA19030 N 0.430
CRE03995 Caenorhabditis remanei CRE03995 N 0.459
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.463
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.729
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.450
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.450
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.431
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.435
L596_g20063 Steinernema carpocapsae L596_g20063 N 0.435
L892_g15959 Steinernema scapterisci L892_g15959 N 0.482
L892_g26355 Steinernema scapterisci L892_g26355 N 0.482
L893_g3116 Steinernema glaseri L893_g3116 N 0.434
L898_g26664 Steinernema monticolum L898_g26664 N 0.416
LCUP005047 Lucilia cuprina LCUP005047 N 0.433
LOAG_04347 Loa loa LOAG_04347 N 0.463
MDOA007633 Musca domestica MDOA007633 N 0.430
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.470
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.470
Minc01744 Meloidogyne incognita Minc01744 N 0.476
Minc10016 Meloidogyne incognita Minc10016 N 0.476
ML09221a Mnemiopsis leidyi ML09221a N 0.417
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.463
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.436
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.456
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.463
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.450
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.463
PPA02261 Pristionchus pacificus PPA02261 N 0.435
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.474
RPRC006380 Rhodnius prolixus RPRC006380 I 0.418
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.497
RSKR_0000472700 Rhabditophanes kr3021 RSKR_0000472700 N 0.457
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.497
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.456
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.435
SMU15031660 Schmidtea mediterranea SMU15031660 N 0.422
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.474
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.419
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.468
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.474
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.435
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.422
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.460
tetur01g10640 Tetranychus urticae tetur01g10640 N 0.421
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.435
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.513
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.450
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.463