SMUV_0000949901 (Syphacia muris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMUV_0000949901 T336971_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000949901-mRNA-1 Sox 65 132

Links

Other Sox family TFs
Other Syphacia muris TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DME_0000639401 Dracunculus medinensis DME_0000639401 N 0.659
ASU_11889 Ascaris suum ASU_11889 N 0.637
ALUE_0001931801 Ascaris lumbricoides ALUE_0001931801 N 0.637
TCNE_0001183201 Toxocara canis TCNE_0001183201 N 0.635
Minc08472 Meloidogyne incognita Minc08472 N 0.595
BXY_1648300 Bursaphelenchus xylophilus BXY_1648300 N 0.585
MhA1_Contig389.frz3.gene3 Meloidogyne hapla MhA1_Contig389.frz3.gene3 N 0.566
nDi.2.2.2.g05271 Dirofilaria immitis nDi.2.2.2.g05271 N 0.536
L596_g6816 Steinernema carpocapsae L596_g6816 N 0.536
nAv.1.0.1.g07983 Acanthocheilonema viteae nAv.1.0.1.g07983 N 0.536
L892_g20462 Steinernema scapterisci L892_g20462 N 0.536
L889_g27021 Steinernema feltiae L889_g27021 N 0.530
L898_g23157 Steinernema monticolum L898_g23157 N 0.530
L893_g28874 Steinernema glaseri L893_g28874 N 0.530
nLs.2.1.2.g07965 Litomosoides sigmodontis nLs.2.1.2.g07965 N 0.529
nOo.2.0.1.g04772 Onchocerca ochengi nOo.2.0.1.g04772 N 0.521
PTRK_0000295600 Parastrongyloides trichosuri PTRK_0000295600 N 0.515
PTRK_0000146000 Parastrongyloides trichosuri PTRK_0000146000 N 0.515
SSTP_0000600400 Strongyloides stercoralis SSTP_0000600400 N 0.509
SVE_1898000 Strongyloides venezuelensis SVE_1898000 N 0.509
RSKR_0001028000 Rhabditophanes kr3021 RSKR_0001028000 N 0.509
SPAL_0000268400 Strongyloides papillosus SPAL_0000268400 N 0.509
Bm10737 Brugia malayi Bm10737 N 0.503
TCLT_0001028201 Thelazia callipaeda TCLT_0001028201 N 0.493
BTMF_0000904601 Brugia timori BTMF_0000904601 N 0.493
EEL_0000994401 Elaeophora elaphi EEL_0000994401 N 0.493
WUBG_09447 Wuchereria bancrofti WUBG_09447 N 0.493
WBGene00246118 Onchocerca volvulus WBGene00246118 N 0.460
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N 0.439
LOAG_07813 Loa loa LOAG_07813 N 0.429