SVE_0008400 (Strongyloides venezuelensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SVE_0008400 T337057_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.440 0.319
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.440 0.319
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.440 0.319
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.440 0.319
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.440 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0008400.1 Sox 38 106

Links

Other Sox family TFs
Other Strongyloides venezuelensis TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_225428 Agaricus bisporus AGABI2DRAFT_225428 I 0.421
M378DRAFT_169792 Amanita muscaria M378DRAFT_169792 I 0.419
M378DRAFT_155487 Amanita muscaria M378DRAFT_155487 I 0.421
GB51010 Apis mellifera GB51010 I 0.415
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.423
AGOS_ADL331C Ashbya gossypii AGOS_ADL331C I 0.443
CBG07189 Caenorhabditis briggsae CBG07189 I 0.420
CBG16279 Caenorhabditis briggsae CBG16279 I 0.429
A1O1_00170 Capronia coronata A1O1_00170 I 0.427
A1O3_02036 Capronia epimyces A1O3_02036 I 0.427
PV04_01817 Capronia semiimmersa PV04_01817 I 0.453
Z519_03381 Cladophialophora bantiana Z519_03381 I 0.453
G647_00298 Cladophialophora carrionii G647_00298 I 0.453
PV07_10630 Cladophialophora immunda PV07_10630 I 0.453
A1O5_04108 Cladophialophora psammophila A1O5_04108 I 0.453
A1O7_00275 Cladophialophora yegresii A1O7_00275 I 0.453
CC1G_13679 Coprinopsis cinerea CC1G_13679 I 0.419
CC1G_05834 Coprinopsis cinerea CC1G_05834 N 0.428
L804_03658 Cryptococcus gattii L804_03658 I 0.469
CNG02110 Cryptococcus neoformans CNG02110 I 0.462
DICSQDRAFT_139297 Dichomitus squalens DICSQDRAFT_139297 N 0.424
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.431
Ecym_3473 Eremothecium cymbalariae Ecym_3473 I 0.443
UCREL1_2892 Eutypa lata UCREL1_2892 I 0.457
PV10_01892 Exophiala mesophila PV10_01892 I 0.453
PV06_03562 Exophiala oligosperma PV06_03562 I 0.427
PV11_08420 Exophiala sideris PV11_08420 I 0.427
PV08_05977 Exophiala spinifera PV08_05977 I 0.427
PV05_11046 Exophiala xenobiotica PV05_11046 I 0.427
FIBRA_06439 Fibroporia radiculosa FIBRA_06439 N 0.424
FOMPIDRAFT_1062542 Fomitopsis pinicola FOMPIDRAFT_1062542 N 0.422
FOMPIDRAFT_1048193 Fomitopsis pinicola FOMPIDRAFT_1048193 I 0.419
Z517_08752 Fonsecaea pedrosoi Z517_08752 I 0.453
GALMADRAFT_213842 Galerina marginata GALMADRAFT_213842 I 0.452
CMQ_1586 Grosmannia clavigera CMQ_1586 I 0.434
GYMLUDRAFT_85036 Gymnopus luxurians GYMLUDRAFT_85036 I 0.493
GYMLUDRAFT_162520 Gymnopus luxurians GYMLUDRAFT_162520 I 0.445
M413DRAFT_289523 Hebeloma cylindrosporum M413DRAFT_289523 I 0.435
e_gw1.12.557.1 Heterobasidion annosum e_gw1.12.557.1 I 0.419
HETIRDRAFT_55525 Heterobasidion irregulare HETIRDRAFT_55525 I 0.419
HYDPIDRAFT_154960 Hydnomerulius pinastri HYDPIDRAFT_154960 N 0.428
HYDPIDRAFT_170519 Hydnomerulius pinastri HYDPIDRAFT_170519 I 0.420
XP_002168586.1 Hydra magnipapillata XP_002168586.1 I 0.440
XP_002154864.1 Hydra magnipapillata XP_002154864.1 I 0.440
JAAARDRAFT_117714 Jaapia argillacea JAAARDRAFT_117714 I 0.426
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.471
KNAG_0H00720 Kazachstania naganishii KNAG_0H00720 I 0.429
SAKL0B07656g Lachancea kluyveri SAKL0B07656g I 0.449
MELLADRAFT_111305 Melampsora laricipopulina MELLADRAFT_111305 I 0.428
Moror_17490 Moniliophthora roreri Moror_17490 I 0.447
Moror_16360 Moniliophthora roreri Moror_16360 I 0.430
NV14822 Nasonia vitripennis NV14822 I 0.446
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I 0.454
NCAS_0E02010 Naumovozyma castellii NCAS_0E02010 I 0.469
NDAI_0E03570 Naumovozyma dairenensis NDAI_0E03570 I 0.433
PTRK_0001068400 Parastrongyloides trichosuri PTRK_0001068400 I 0.571
PAXINDRAFT_180477 Paxillus involutus PAXINDRAFT_180477 N 0.424
PAXRUDRAFT_824795 Paxillus rubicundulus PAXRUDRAFT_824795 N 0.424
PAXRUDRAFT_106123 Paxillus rubicundulus PAXRUDRAFT_106123 I 0.416
PAXRUDRAFT_47613 Paxillus rubicundulus PAXRUDRAFT_47613 I 0.415
fgenesh1_pg.C_scaffold_7000434 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000434 I 0.424
JL09_g4172 Pichia kudriavzevii JL09_g4172 I 0.438
PILCRDRAFT_817978 Piloderma croceum PILCRDRAFT_817978 I 0.419
PISMIDRAFT_655632 Pisolithus microcarpus PISMIDRAFT_655632 I 0.419
M404DRAFT_69899 Pisolithus tinctorius M404DRAFT_69899 I 0.417
M404DRAFT_1003059 Pisolithus tinctorius M404DRAFT_1003059 I 0.419
PLEOSDRAFT_1088079 Pleurotus ostreatus PLEOSDRAFT_1088079 I 0.419
POSPLDRAFT_103612 Postia placenta POSPLDRAFT_103612 N 0.431
PFL1_03871 Pseudozyma flocculosa PFL1_03871 I 0.433
PHSY_004115 Pseudozyma hubeiensis PHSY_004115 I 0.437
Z518_08063 Rhinocladiella mackenziei Z518_08063 I 0.453
SU7_3656 Saccharomyces arboricola SU7_3656 I 0.433
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I 0.454
Scas_Contig614.4 Saccharomyces castellii Scas_Contig614.4 I 0.469
ROX1 Saccharomyces cerevisiae YPR065W D 0.440
22516_YPR065W Saccharomyces mikatae 22516_YPR065W I 0.433
23192_YPR065W Saccharomyces paradoxus 23192_YPR065W I 0.433
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.431
AACERI_AaceriADL331C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL331C I 0.443
SCHCODRAFT_258750 Schizophyllum commune SCHCODRAFT_258750 N 0.416
SCHCODRAFT_232060 Schizophyllum commune SCHCODRAFT_232060 N 0.443
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I 0.462
SCLCIDRAFT_1207129 Scleroderma citrinum SCLCIDRAFT_1207129 I 0.419
SERLA73DRAFT_84283 Serpula lacrymans SERLA73DRAFT_84283 I 0.419
M422DRAFT_111323 Sphaerobolus stellatus M422DRAFT_111323 I 0.426
M422DRAFT_115248 Sphaerobolus stellatus M422DRAFT_115248 I 0.426
SPAL_0001526200 Strongyloides papillosus SPAL_0001526200 I 0.741
SSTP_0001261500 Strongyloides stercoralis SSTP_0001261500 I 0.741
CY34DRAFT_283265 Suillus luteus CY34DRAFT_283265 I 0.419
tetur23g00840 Tetranychus urticae tetur23g00840 I 0.441
TBLA_0J01680 Tetrapisispora blattae TBLA_0J01680 I 0.418
TDEL_0C04960 Torulaspora delbrueckii TDEL_0C04960 I 0.417
BN946_scf184603.g4 Trametes cinnabarina BN946_scf184603.g4 N 0.431
fgeneshTM_pg.8_#_254 Tremella mesenterica fgeneshTM_pg.8_#_254 I 0.454
TC007345 Tribolium castaneum TC007345 I 0.424
TVAG_010230 Trichomonas vaginalis TVAG_010230 I 0.482
TVAG_201900 Trichomonas vaginalis TVAG_201900 I 0.428
TVAG_344020 Trichomonas vaginalis TVAG_344020 I 0.482
Kpol_401p4 Vanderwaltozyma polyspora Kpol_401p4 I 0.435
ZBAI_00827 Zygosaccharomyces bailii ZBAI_00827 I 0.447
ZBAI_06138 Zygosaccharomyces bailii ZBAI_06138 I 0.447
ZYRO0D15312g Zygosaccharomyces rouxii ZYRO0D15312g I 0.447