SVUK_0000686401 (Strongylus vulgaris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SVUK_0000686401 T337077_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0000686401-mRNA-1 Sox 1 64

Links

Other Sox family TFs
Other Strongylus vulgaris TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NECAME_06830 Necator americanus NECAME_06830 N 0.643
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.612
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.612
NBR_0000051501 Nippostrongylus brasiliensis NBR_0000051501 N 0.585
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N 0.559
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.557
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.554
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.553
CJA17191 Caenorhabditis japonica CJA17191 N 0.544
CBN15844 Caenorhabditis brenneri CBN15844 N 0.516
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.503
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.498
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.483
CRE28315 Caenorhabditis remanei CRE28315 N 0.482
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.481
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.474
LOAG_15875 Loa loa LOAG_15875 N 0.474
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.471
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.470
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.463
hmg-6 Caenorhabditis elegans WBGene00009827 N 0.461
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.459
ASIM_0000224701 Anisakis simplex ASIM_0000224701 N 0.454
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.453
L892_g13433 Steinernema scapterisci L892_g13433 I 0.448
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.448
TOX2 Sorex araneus ENSSARG00000001080 N 0.447
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.447
ISCW005293 Ixodes scapularis ISCW005293 N 0.445
ANCDUO_24180 Ancylostoma duodenale ANCDUO_24180 N 0.442
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.441
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.441
ASU_00726 Ascaris suum ASU_00726 N 0.441
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.441
CGI_10018256 Crassostrea gigas CGI_10018256 N 0.440
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.439
LotgiG144192 Lottia gigantea LotgiG144192 N 0.439
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.439
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.439
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.438
ANCCAN_14841 Ancylostoma caninum ANCCAN_14841 N 0.437
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.436
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.436
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.436
Bm2393 Brugia malayi Bm2393 N 0.436
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.436
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.436
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.436
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.436
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.435
LotgiG176647 Lottia gigantea LotgiG176647 N 0.433
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.432
TCM_014800 Theobroma cacao TCM_014800 N 0.431
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.430
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.430
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.430
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.430
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.430
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.428
ENSPFOG00000017300 Poecilia formosa ENSPFOG00000017300 N 0.427
ENSXMAG00000016160 Xiphophorus maculatus ENSXMAG00000016160 N 0.427
mgf006762m Mimulus guttatus mgf006762m N 0.427
pbrm1l Danio rerio ENSDARG00000077038 N 0.427
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.427
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.426
ASU_00939 Ascaris suum ASU_00939 N 0.426
Contig22304.0.g107 Oxytricha trifallax Contig22304.0.g107 N 0.423
CBG18873 Caenorhabditis briggsae CBG18873 N 0.418