T265_14506 (Opisthorchis viverrini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 T265_14506 T337107_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox102F
M03981_2.00
Drosophila melanogaster
ATTGTTCGGTGKN

NMCACCGAACAAT
SELEX
Nitta et al.(2015)
Sox102F_1
0.425 0.679
Sox102F
M03982_2.00
Drosophila melanogaster
NAACAATDDCATTGTTN

NAACAATGHHATTGTTN
SELEX
Nitta et al.(2015)
Sox102F_2
0.425 0.679
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_14506 Sox 40 95

Links

Other Sox family TFs
Other Opisthorchis viverrini TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
csin108932 Clonorchis sinensis csin108932 I 0.670
GPLIN_000596700 Globodera pallida GPLIN_000596700 I 0.629
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.629
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.624
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.599
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.599
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.585
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.585
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.583
ACOM029353 Anopheles coluzzii ACOM029353 I 0.558
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.558
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.558
AMEC000538 Anopheles melas AMEC000538 I 0.558
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.558
sox-2 Caenorhabditis elegans WBGene00004949 I 0.558
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.551
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I 0.551
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.549
ENSP00000322568 Macaca fascicularis ENSP00000322568 I 0.529
SOX8 Equus caballus ENSECAG00000016320 I 0.524
MESCA012239 Megaselia scalaris MESCA012239 I 0.523
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I 0.521
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N 0.519
PFICI_02946 Pestalotiopsis fici PFICI_02946 N 0.514
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.514
PEX1_064750 Penicillium expansum PEX1_064750 N 0.514
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.508
GPLIN_001405800 Globodera pallida GPLIN_001405800 I 0.507
MESCA006364 Megaselia scalaris MESCA006364 N 0.504
RPRC001038 Rhodnius prolixus RPRC001038 N 0.504
A1O9_05704 Exophiala aquamarina A1O9_05704 N 0.503
sox13.S Xenopus laevis XB-GENE-865496 I 0.500
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.498
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.498
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.497
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N 0.496
sox5.S Xenopus laevis XB-GENE-865667 I 0.494
CAA46605 Xenopus laevis CAA46605 N 0.488
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N 0.485
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N 0.482
DRE_00029 Drechslerella stenobrocha DRE_00029 N 0.478
H072_9933 Dactylellina haptotyla H072_9933 N 0.478
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N 0.477
XP_002170844.1 Hydra magnipapillata XP_002170844.1 I 0.475
L798_12049 Zootermopsis nevadensis L798_12049 I 0.473
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N 0.472
SOX2 Procavia capensis ENSPCAG00000003690 I 0.471
CAA46607 Xenopus laevis CAA46607 N 0.471
SOX2 Felis catus ENSFCAG00000029205 I 0.471
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N 0.469
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N 0.469
XP_002935940 Xenopus tropicalis XP_002935940 N 0.461
MESCA006188 Megaselia scalaris MESCA006188 N 0.455
Gfo_R006305 Geospiza fortis Gfo_R006305 I 0.449
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.446
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.446
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.444
UCREL1_749 Eutypa lata UCREL1_749 N 0.440
CC1G_05598 Coprinopsis cinerea CC1G_05598 N 0.439
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N 0.438
AMEM007694 Anopheles merus AMEM007694 N 0.437
HMEL006651 Heliconius melpomene HMEL006651 I 0.434
HMEL002398 Heliconius melpomene HMEL002398 I 0.434
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.432
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.428
UCREL1_469 Eutypa lata UCREL1_469 N 0.427
nAv.1.0.1.g07335 Acanthocheilonema viteae nAv.1.0.1.g07335 N 0.427
LCUP002303 Lucilia cuprina LCUP002303 I 0.425
CLEC008310 Cimex lectularius CLEC008310 I 0.425
LDEC003820 Leptinotarsa decemlineata LDEC003820 I 0.425
BXY_1610900 Bursaphelenchus xylophilus BXY_1610900 I 0.425
nLs.2.1.2.g06545 Litomosoides sigmodontis nLs.2.1.2.g06545 I 0.425
nDi.2.2.2.g02312 Dirofilaria immitis nDi.2.2.2.g02312 I 0.425
nOo.2.0.1.g02512 Onchocerca ochengi nOo.2.0.1.g02512 I 0.425
scaffold4-EXSNAP2012.18 Pristionchus exspectatus scaffold4-EXSNAP2012.18 I 0.425
TCNE_0000724501 Toxocara canis TCNE_0000724501 I 0.425
SMUV_0000354401 Syphacia muris SMUV_0000354401 I 0.425
nAv.1.0.1.g05485 Acanthocheilonema viteae nAv.1.0.1.g05485 I 0.425
Hba_18920 Heterorhabditis bacteriophora Hba_18920 I 0.425
ASU_03729 Ascaris suum ASU_03729 I 0.425
MDOA015569 Musca domestica MDOA015569 I 0.425
Ocbimv22009939m.g Octopus bimaculoides Ocbimv22009939m.g I 0.425
EEL_0000990601 Elaeophora elaphi EEL_0000990601 I 0.425
EVEC_0000027701 Enterobius vermicularis EVEC_0000027701 I 0.425
BGLB012549 Biomphalaria glabrata BGLB012549 I 0.425
YQE_01092 Dendroctonus ponderosae YQE_01092 I 0.425
GM26768 Drosophila sechellia FBgn0181621 I 0.425
GL15612 Drosophila persimilis FBgn0153216 I 0.425
GI14086 Drosophila mojavensis FBgn0136840 I 0.425
GH24007 Drosophila grimshawi FBgn0131463 I 0.425
GJ16151 Drosophila virilis FBgn0203336 I 0.425
GE14503 Drosophila yakuba FBgn0232107 I 0.425
HMEL008081 Heliconius melpomene HMEL008081 I 0.425
HelroG148116 Helobdella robusta HelroG148116 I 0.425
GB41464 Apis mellifera GB41464 I 0.425
GG16436 Drosophila erecta FBgn0108667 I 0.425
GF20041 Drosophila ananassae FBgn0097048 I 0.425
BGIBMGA009439 Bombyx mori BGIBMGA009439 I 0.425
ACYPI008847 Acyrthosiphon pisum ACYPI008847 I 0.425
ACEP25697 Atta cephalotes ACEP25697 I 0.425
Bm5912 Brugia malayi Bm5912 I 0.425
CapteG26259 Capitella teleta CapteG26259 I 0.425
GA10800 Drosophila pseudoobscura FBgn0070856 I 0.425
Sox102F Drosophila simulans FBgn0061239 I 0.425
Sox102F Drosophila melanogaster FBgn0039938 D 0.425
ISCW023359 Ixodes scapularis ISCW023359 I 0.425
GK13587 Drosophila willistoni FBgn0215595 I 0.425
SINV24752 Solenopsis invicta SINV24752 I 0.425
SMAR012049 Strigamia maritima SMAR012049 I 0.425
RPRC013413 Rhodnius prolixus RPRC013413 N 0.425
KGM_12369 Danaus plexippus KGM_12369 I 0.425
PHUM095890 Pediculus humanus PHUM095890 I 0.425
TC007419 Tribolium castaneum TC007419 I 0.425
WBGene00241896 Onchocerca volvulus WBGene00241896 I 0.425
Cflo_00400--XP_392414.3_APIME Camponotus floridanus Cflo_00400--XP_392414.3_APIME I 0.425
Hsal_00820--XP_001120983.1_APIME Harpegnathos saltator Hsal_00820--XP_001120983.1_APIME I 0.425
Brh_R008736 Buceros rhinoceros Brh_R008736 I 0.425
WUBG_01152 Wuchereria bancrofti WUBG_01152 I 0.425
YQE_00723 Dendroctonus ponderosae YQE_00723 I 0.425
NV17081 Nasonia vitripennis NV17081 I 0.425
Ppa-egl-13 Pristionchus pacificus PPA18718 I 0.425
LotgiG121785 Lottia gigantea LotgiG121785 I 0.425
L798_06009 Zootermopsis nevadensis L798_06009 I 0.425
MCINX011158 Melitaea cinxia MCINX011158 I 0.425
LOAG_17406 Loa loa LOAG_17406 I 0.425
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.423
L596_g12387 Steinernema carpocapsae L596_g12387 I 0.421
SVE_0106200 Strongyloides venezuelensis SVE_0106200 I 0.421
L893_g3677 Steinernema glaseri L893_g3677 I 0.421
RSKR_0000861000 Rhabditophanes kr3021 RSKR_0000861000 I 0.421
SPAL_0001184600 Strongyloides papillosus SPAL_0001184600 I 0.421
L898_g20001 Steinernema monticolum L898_g20001 I 0.421
L892_g2830 Steinernema scapterisci L892_g2830 I 0.421
L889_g29948 Steinernema feltiae L889_g29948 I 0.421
nRc.2.0.1.g07393 Romanomermis culicivorax nRc.2.0.1.g07393 I 0.421
PTRK_0000206000 Parastrongyloides trichosuri PTRK_0000206000 I 0.421
SSTP_0000859500 Strongyloides stercoralis SSTP_0000859500 I 0.421
D918_08317 Trichuris suis D918_08317 N 0.420
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.419
CGI_10012168 Crassostrea gigas CGI_10012168 I 0.419
D915_11240 Fasciola hepatica D915_11240 N 0.418
KGM_19696 Danaus plexippus KGM_19696 I 0.418
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.415