TTAC_0000092501 (Hydatigera taeniaeformis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 TTAC_0000092501 T337243_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox6
M00828_2.00
Mus musculus
WTTGTNNNN

NNNNACAAW
PBM
Weirauch et al.(2013)
pTH3862
0.467 0.435
SOX6
M05892_2.00
Homo sapiens
DRACAATRVN

NBYATTGTYH
SMiLE-seq
Isakova et al.(2017)
SOX6
0.467 0.435
Sox6
M08169_2.00
Mus musculus
BCWTTGTYYY

RRRACAAWGV
ChIP-seq
Mathelier et al.(2014)
MA0515.1
0.467 0.435
Sox6
M09640_2.00
Mus musculus
BHWTTGTBNN

NNVACAAWDV
Misc
Heinz et al.(2010)
Myotubes-Sox6_GSE32627
0.467 0.435
SOX6
M11300_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX6_Q5
0.467 0.435
Sox5
M00203_2.00
Mus musculus
ATTGTBNN

NNVACAAT
PBM
Badis et al.(2009)
Sox5_3459
0.440 0.420
SOX5
M05894_2.00
Homo sapiens
DVACAATRVN

NBYATTGTBH
SMiLE-seq
Isakova et al.(2017)
SOX5
0.440 0.420
Sox5
M02719_2.00
Mus musculus
NAACAAT

ATTGTTN
SELEX
Mathelier et al.(2014)
MA0087.1
0.440 0.420
SOX5
M09390_2.00
Homo sapiens
NAACAATN

NATTGTTN
Misc
Kulakovskiy et al.(2013)
SOX5_HUMAN.H11MO.0.C
0.440 0.420
Sox5
M09404_2.00
Mus musculus
NAACAATN

NATTGTTN
Misc
Kulakovskiy et al.(2013)
SOX5_MOUSE.H11MO.0.C
0.440 0.420
SOX5
M11309_2.00
Homo sapiens
NNAACAATNN

NNATTGTTNN
Transfac
Matys et al.(2006)
V$SOX5_01
0.440 0.420
SOX5
M11310_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX5_Q5
0.440 0.420
Sox13
M00212_2.00
Mus musculus
RAACAATW

WATTGTTY
PBM
Badis et al.(2009)
Sox13_1718
0.440 0.391
SOX13
M08166_2.00
Homo sapiens
NNACAATGVNN

NNBCATTGTNN
ChIP-seq
Mathelier et al.(2014)
MA1120.1
0.440 0.391
Sox15
M03973_2.00
Drosophila melanogaster
WYTGTTCGGTD

HACCGAACARW
SELEX
Nitta et al.(2015)
Sox15_1
0.427 0.362
Sox15
M03974_2.00
Drosophila melanogaster
VACAATDNCATTGTN

NACAATGNHATTGTB
SELEX
Nitta et al.(2015)
Sox15_2
0.427 0.362
Sox15
M06450_2.00
Drosophila melanogaster
RWACAATR

YATTGTWY
B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613
0.427 0.362
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000092501-mRNA-1 Sox 76 144

Links

Other Sox family TFs
Other Hydatigera taeniaeformis TFs

Invalid Input OrderBy

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action