CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.97__20
(
Bigelowiella natans
)
Sox,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
PF00172 (Zn_clus)
IPR000910
IPR001138
fgenesh1_pg.97__20
T337276_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
JGI_V11_82789
Sox
118
200
PKRAKHAYEFFQMDVREKVMADVMSTMGLSNPNSKFVKGKLPCKVNKALAKLWNTLKNHERDQYQKRASEDRQRYRNQMDEQE
JGI_V11_82789
Zinc cluster
400
438
LACVHCVTRKMKCEGGFPCTRCRKSNIEYLCKKYEDGDK
Links
Other
Sox,Zinc cluster
family TFs
Other
Bigelowiella natans
TFs
0 Related TFs
">No related TF found