CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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stat5b
(
Danio rerio
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSDARG00000055588
T337397_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including cell surface receptor signaling pathway; defense response; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated and signal transduction. Predicted to be located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in growth hormone insensitivity syndrome with immune dysregulation 1 and growth hormone insensitivity syndrome with immune dysregulation 2. Orthologous to human STAT5A (signal transducer and activator of transcription 5A) and STAT5B (signal transducer and activator of transcription 5B). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Stat5b
M09421_2.00
Mus musculus
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_MOUSE.H11MO.0.A
0.860
0.860
STAT5B
M09417_2.00
Homo sapiens
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_HUMAN.H11MO.0.A
0.852
0.852
Stat5a
M09420_2.00
Mus musculus
TTCYMRGAAN
NTTCYKRGAA
Misc
Kulakovskiy et al.(2013)
STA5A_MOUSE.H11MO.0.A
0.852
0.852
STAT5B
M11371_2.00
Homo sapiens
NDWTTCYNGGAAWHN
NDWTTCCNRGAAWHN
Transfac
Matys et al.(2006)
V$STAT5B_01
0.832
0.832
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000110501
STAT
332
583
FIIEKQPPQVLKTQTKFSATVRLLVGGKLNVHMNPPQVKATIISEQQAKAILKNENTRKSESSGDILNNNCVMEYHQTTGNLSAHFRTMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGVNELVFHVKTLSLPVVVIVHGSQDNNATATVLWDNAFSEPGRVPFVVPDKVVWPQLCEALNMKYKSEVQSDRGLSEDNLVFLAQKAFSSSSNNPEDYSSMTITWSQFNRESLPGRNFTFWQWFDGVIELMK
ENSDARP00000112066
STAT
332
582
FIIEKQPPQVLKTQTKFSATVRLLVGGKLNVHMNPPQVKATIISEQQAKAILKNENTRNESSGDILNNNCVMEYHQTTGNLSAHFRTMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGVNELVFHVKTLSLPVVVIVHGSQDNNATATVLWDNAFSEPGRVPFVVPDKVVWPQLCEALNMKYKSEVQSDRGLSEDNLVFLAQKAFSSSSNNPEDYSSMTITWSQFNRESLPGRNFTFWQWFDGVIELMK
ENSDARP00000138608
STAT
332
582
FIIEKQPPQVLKTQTKFSATVRLLVGGKLNVHMNPPQVKATIISEQQAKAILKNENTRNESSGDILNNNCVMEYHQTTGNLSAHFRTMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGVNELVFHVKTLSLPVVVIVHGSQDNNATATVLWDNAFSEPGRVPFVVPDKVVWPQLCEALNMKYKSEVQSDRGLSEDNLVFLAQKAFSSSSNNPEDYSSMTITWSQFNRESLPGRNFTFWQWFDGVIELMK
Links
Other
STAT
family TFs
Other
Danio rerio
TFs
107 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy