CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Stat6
(
Mus musculus
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSMUSG00000002147
T337541_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in interleukin-4-mediated signaling pathway and positive regulation of cold-induced thermogenesis. Acts upstream of or within several processes, including T-helper 1 cell lineage commitment; mammary gland development; and regulation of nucleobase-containing compound metabolic process. Located in chromatin; cytoplasm; and nucleus. Is expressed in several structures, including 2-cell stage embryo; alimentary system; lower urinary tract; male reproductive system; and olfactory epithelium. Human ortholog(s) of this gene implicated in lipoid nephrosis; prostate carcinoma; and urinary schistosomiasis. Orthologous to human STAT6 (signal transducer and activator of transcription 6). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Stat6
M08173_2.00
Mus musculus
NNBTTCYWVRGAANN
NNTTCYBWRGAAVNN
ChIP-seq
Mathelier et al.(2014)
MA0520.1
(Direct)
(Direct)
Stat6
M09418_2.00
Mus musculus
BDBTTCHBDRGAAV
BTTCYHVDGAAVHV
Misc
Kulakovskiy et al.(2013)
STAT6_MOUSE.H11MO.0.A
(Direct)
(Direct)
Stat6
M09643_2.00
Mus musculus
NNTTCYNNRGAA
TTCYNNRGAANN
Misc
Heinz et al.(2010)
CD4-Stat6_GSE22104
(Direct)
(Direct)
Stat6
M09644_2.00
Mus musculus
TTCCNNAGAA
TTCTNNGGAA
Misc
Heinz et al.(2010)
Macrophage-Stat6_GSE38377
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000089708
STAT
273
526
FLVEKQPPQVLKTQTKFQAGVRFLLGLQFLGTSAKPPMVRADMVTEKQARELSLAQGPGTGVESTGEIMNNTVPLENSIPSNCCSALFKNLLLKKIKRCERKGTESVTEEKCAVLFSTSFTLGPNKLLIQLQALSLPLVVIVHGNQDNNAKATILWDNAFSEMDRVPFVVAERVPWEKMCETLNLKFMAEVGTSRGLLPEHFLFLAQKIFNDNSLSVEAFQHRCVSWSQFNKEILLGRGFTFWQWFDGVLDLTK
Links
Other
STAT
family TFs
Other
Mus musculus
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy