STKL1 (Arabidopsis thaliana)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04504 (DUF573) IPR007592 AT4G00238 T338213_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STKL1
M02492_2.00		 Arabidopsis thaliana
NNNNVBNNNN
NNNNVBNNNN		 PBM
Weirauch et al.(2014)
pTH7440		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STKL2
M07271_2.00 		Arabidopsis thaliana
WWYMTTATCCAHW
WDTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT4G00250_col_a 		0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02492_2.00 Storekeeper 53 141

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G00238.1 Storekeeper 140 228

Links

Other Storekeeper family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action