STKL2 (Arabidopsis thaliana)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04504 (DUF573) IPR007592 AT4G00250 T338214_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STKL2
M07271_2.00
Arabidopsis thaliana
WWYMTTATCCAHW

WDTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT4G00250_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STKL1
M02492_2.00
Arabidopsis thaliana
NNNNVBNNNN

NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH7440
0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G00250.1 Storekeeper 115 203

Links

Other Storekeeper family TFs
Other Arabidopsis thaliana TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
STKL1 Arabidopsis thaliana AT4G00238 D 0.798
Al_scaffold_0007_3014 Arabidopsis lyrata Al_scaffold_0007_3014 I 0.708