Carubv10020457m.g (Capsella rubella)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04504 (DUF573) IPR007592 Carubv10020457m.g T338987_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT4G00390
M01085_2.00
Arabidopsis thaliana
NACCGGTCNNNN

NNNNGACCGGTN
PBM
Sullivan et al.(2014)
pTH9305
0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10020457m Storekeeper 156 247

Links

Other Storekeeper family TFs
Other Capsella rubella TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT4G00390 Arabidopsis thaliana AT4G00390 D 0.747
AT1G61730 Arabidopsis thaliana AT1G61730 I 0.826
Cagra.8164s0008 Capsella grandiflora Cagra.8164s0008 I 1.000
Bostr.10040s0010 Boechera stricta Bostr.10040s0010 I 0.848
fgenesh2_kg.2__286__AT1G61730.1 Arabidopsis lyrata fgenesh2_kg.2__286__AT1G61730.1 I 0.815
Bra031402 Brassica rapa Bra031402 N 0.807
Bra027078 Brassica rapa Bra027078 N 0.772
Bra021317 Brassica rapa Bra021317 N 0.728
Bo9g040950 Brassica oleracea Bo9g040950 N 0.772
Bo4g087160 Brassica oleracea Bo4g087160 N 0.739
Thhalv10023503m.g Eutrema salsugineum Thhalv10023503m.g N 0.818