CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CAOG_05512
(
Capsaspora owczarzaki
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
CAOG_05512
T339212_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAOG_05512
M01027_2.00
Capsaspora owczarzaki
NTVDCACNYN
NRNGTGHBAN
PBM
SebePedros et al.(2013)
pEX0020
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.734
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01027_2.00
T-box
52
232
VALESSKLWAKFADATNEMIVTRTGRNMFPVLRFDITNLDPNTLYAIMLDIAPADGIRWKYVSGEWWVGGKSDAPTGPTMYVHPDSPKSGKYWMQRPISFSRLKLTNRPNTKGNIVLSSLHKYQPQLHIVSVPSMNAPTHGQPTSVHTFPETAFIAATAYQNDYIKDLKIKNNPFAKAFLN
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAOG_05512T0
T-box
70
250
VALESSKLWAKFADATNEMIVTRTGRNMFPVLRFDITNLDPNTLYAIMLDIAPADGIRWKYVSGEWWVGGKSDAPTGPTMYVHPDSPKSGKYWMQRPISFSRLKLTNRPNTKGNIVLSSLHKYQPQLHIVSVPSMNAPTHGQPTSVHTFPETAFIAATAYQNDYIKDLKIKNNPFAKAFLN
Links
Other
T-box
family TFs
Other
Capsaspora owczarzaki
TFs
0 Related TFs
">No related TF found