CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX6
(
Anolis carolinensis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSACAG00000015031
T339589_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX6
M05805_2.00
Homo sapiens
NRSGTGTBAN
NTVACACSYN
SELEX
Yin et al.(2017)
TBX6_eDBD_HT-SELEX
0.743
0.761
TBX6
M05806_2.00
Homo sapiens
NTVRCACBHN
NDVGTGYBAN
SELEX
Yin et al.(2017)
TBX6_eDBD_Methyl-HT-SELEX
0.743
0.761
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000014766
T-box
93
272
MSLENGELWKRFSSIGTEMIITKAGRRMFPQLKVSVTGLDPEAKYLLLVDVVPVGGSRYKWQGKRWEASGKAELPPPDRVYIHPDSPAPGAHWMRQPISFHRLKLTNNTLDPHGHLIVHSMHRYQPRVHVVGAGGRRGAGGGCASFTFPETQFLTVTAYQNPQITQMKIESNPFAKGFRE
Links
Other
T-box
family TFs
Other
Anolis carolinensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ogr16054
Ophisaurus gracilis
Ogr16054
I
0.920
Pvit_12103
Pogona vitticeps
Pvit_12103
I
0.915
TBX6
Homo sapiens
ENSG00000149922
D
0.743
BAC20262
Xenopus laevis
BAC20262
I
0.737
AAI69776
Xenopus laevis
AAI69776
I
0.737
ABC75836
Xenopus laevis
ABC75836
I
0.737