ENSAMEG00000001098 (Ailuropoda melanoleuca)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSAMEG00000001098 T339592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN

NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.867 0.896
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA

TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.867 0.896
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT

AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.867 0.896
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.867 0.896
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA

TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.867 0.896
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA

TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.867 0.896
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV

BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.867 0.896
Tbx1
M11386_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.867 0.896
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN

NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.867 0.896
org-1
M03988_2.00
Drosophila melanogaster
DRGTGTBAD

HTVACACYH
SELEX
Nitta et al.(2015)
org-1_1
0.737 0.703
org-1
M03989_2.00
Drosophila melanogaster
TRACACYTARGTGTGA

TCACACYTARGTGTYA
SELEX
Nitta et al.(2015)
org-1_2
0.737 0.703
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000001146 T-box 65 250

Links

Other T-box family TFs
Other Ailuropoda melanoleuca TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30128.m008984 Ricinus communis 30128.m008984 I 0.000
30199.m000879 Ricinus communis 30199.m000879 I 0.000
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.000
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.000
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.000
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.000
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.000
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.000
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.000
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.000
evm.TU.contig_40008 Carica papaya evm.TU.contig_40008 I 0.000
evm.TU.contig_46342 Carica papaya evm.TU.contig_46342 N 0.000
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.000
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I 0.000
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.000
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.000
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.000
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 0.000
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.000
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.000
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.000
MDP0000846004 Malus domestica MDP0000846004 I 0.000
MDP0000925348 Malus domestica MDP0000925348 I 0.000
mgf026186m Mimulus guttatus mgf026186m I 0.000
Pm004396 Prunus mume Pm004396 I 0.000
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.000
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.000
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.000
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.000