ENSAMEG00000001098 (Ailuropoda melanoleuca)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSAMEG00000001098 T339592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN

NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.867 0.896
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA

TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.867 0.896
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT

AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.867 0.896
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.867 0.896
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA

TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.867 0.896
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA

TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.867 0.896
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV

BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.867 0.896
Tbx1
M11386_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.867 0.896
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN

NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.867 0.896
org-1
M03988_2.00
Drosophila melanogaster
DRGTGTBAD

HTVACACYH
SELEX
Nitta et al.(2015)
org-1_1
0.737 0.703
org-1
M03989_2.00
Drosophila melanogaster
TRACACYTARGTGTGA

TCACACYTARGTGTYA
SELEX
Nitta et al.(2015)
org-1_2
0.737 0.703
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000001146 T-box 65 250

Links

Other T-box family TFs
Other Ailuropoda melanoleuca TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.000
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.000
Bo9g003750 Brassica oleracea Bo9g003750 N 0.000
Bra037388 Brassica rapa Bra037388 N 0.000
PK15950.1 Cannabis sativa PK15950.1 N 0.000
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.000
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N 0.000
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.000
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.000
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.000
MLOC_68772 Hordeum vulgare MLOC_68772 N 0.000
LPERR01G19750 Leersia perrieri LPERR01G19750 N 0.000
LPERR01G19720 Leersia perrieri LPERR01G19720 N 0.000
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.000
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.000
OBART01G22950 Oryza barthii OBART01G22950 N 0.000
OBART01G22980 Oryza barthii OBART01G22980 N 0.000
OB01G32460 Oryza brachyantha OB01G32460 N 0.000
OB01G32480 Oryza brachyantha OB01G32480 N 0.000
ORGLA01G0184700 Oryza glaberrima ORGLA01G0184700 N 0.000
OGLUM01G26700 Oryza glumaepatula OGLUM01G26700 N 0.000
OGLUM01G26760 Oryza glumaepatula OGLUM01G26760 N 0.000
BGIOSGA001192 Oryza indica BGIOSGA001192 N 0.000
BGIOSGA001193 Oryza indica BGIOSGA001193 N 0.000
OLONG_010128 Oryza longistaminata OLONG_010128 N 0.000
OMERI01G21040 Oryza meridionalis OMERI01G21040 N 0.000
ORUFI01G25800 Oryza rufipogon ORUFI01G25800 N 0.000
ORUFI01G25760 Oryza rufipogon ORUFI01G25760 N 0.000
Pavir.J30777 Panicum virgatum Pavir.J30777 N 0.000
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N 0.000
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.000
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.000
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.000
29842.m003592 Ricinus communis 29842.m003592 N 0.000
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.000
Sb03g028170 Sorghum bicolor Sb03g028170 N 0.000
TCM_015351 Theobroma cacao TCM_015351 N 0.000
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N 0.000
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N 0.000
TRIUR3_10842 Triticum urartu TRIUR3_10842 N 0.000
GRMZM2G057955 Zea mays GRMZM2G057955 N 0.000