TBX2 (Bos taurus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSBTAG00000014278 T339653_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.920 1.000
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.920 1.000
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.920 1.000
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.920 1.000
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.920 1.000
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.920 1.000
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.920 1.000
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.920 1.000
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.906 0.950
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.906 0.950
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.906 0.950
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.906 0.950
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.906 0.950
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.887 0.972
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.887 0.967
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.842 0.873
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.808 0.724
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.799 0.657
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.799 0.657
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.799 0.657
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.799 0.657
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.799 0.657
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.799 0.657
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.799 0.657
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.799 0.657
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.799 0.657
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.785 0.657
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.785 0.657
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.785 0.657
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.782 0.707
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000018970 T-box 107 287

Links

Other T-box family TFs
Other Bos taurus TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.B00731 Eucalyptus grandis Eucgr.B00731 I 0.000
cassava14677.m1 Manihot esculenta cassava14677.m1 I 0.000
29974.m000242 Ricinus communis 29974.m000242 I 0.000
Pm029081 Prunus mume Pm029081 I 0.000
Pm025178 Prunus mume Pm025178 I 0.000
Cla019256 Citrullus lanatus Cla019256 I 0.000
Cla018783 Citrullus lanatus Cla018783 I 0.000
Ca_13025 Cicer arietinum Ca_13025 I 0.000
VIT_17s0000g03580 Vitis vinifera VIT_17s0000g03580 I 0.000
VIT_01s0011g03720 Vitis vinifera VIT_01s0011g03720 I 0.000
TCM_019445 Theobroma cacao TCM_019445 I 0.000
TCM_012362 Theobroma cacao TCM_012362 I 0.000
Gorai.007G005700 Gossypium raimondii Gorai.007G005700 I 0.000
cassava46189.m1 Manihot esculenta cassava46189.m1 I 0.000
Eucgr.K02229 Eucalyptus grandis Eucgr.K02229 I 0.000
evm.TU.supercontig_65.44 Carica papaya evm.TU.supercontig_65.44 I 0.000
gene25151-v1.0-hybrid Fragaria vesca gene25151-v1.0-hybrid I 0.000
Gorai.001G074900 Gossypium raimondii Gorai.001G074900 I 0.000
Gorai.006G060400 Gossypium raimondii Gorai.006G060400 I 0.000
Gorai.006G194500 Gossypium raimondii Gorai.006G194500 I 0.000
Bostr.12659s0424 Boechera stricta Bostr.12659s0424 I 0.000
Aquca_041_00009 Aquilegia coerulea Aquca_041_00009 I 0.000
mgf017044m Mimulus guttatus mgf017044m I 0.000
mgf013353m Mimulus guttatus mgf013353m I 0.000
Cucsa.111110 Cucumis sativus Cucsa.111110 I 0.000
Solyc12g036470.1 Solanum lycopersicum Solyc12g036470.1 I 0.000
Solyc04g007300.2 Solanum lycopersicum Solyc04g007300.2 I 0.000
MDP0000879337 Malus domestica MDP0000879337 I 0.000
orange1.1g042908m.g Citrus sinensis orange1.1g042908m.g I 0.000
SapurV1A.0530s0010 Salix purpurea SapurV1A.0530s0010 I 0.000
PGSC0003DMG400005388 Solanum tuberosum PGSC0003DMG400005388 I 0.000
Bra010993 Brassica rapa Bra010993 I 0.000
SapurV1A.0719s0010 Salix purpurea SapurV1A.0719s0010 I 0.000
SapurV1A.1621s0020 Salix purpurea SapurV1A.1621s0020 I 0.000
Bo3g138670 Brassica oleracea Bo3g138670 I 0.000
Thhalv10008699m.g Eutrema salsugineum Thhalv10008699m.g I 0.000
GLYMA07G10311 Glycine max GLYMA07G10311 I 0.000
MDP0000725991 Malus domestica MDP0000725991 I 0.000
Gorai.008G055400 Gossypium raimondii Gorai.008G055400 I 0.000
PRUPE_ppa015301mg Prunus persica PRUPE_ppa015301mg I 0.000
PRUPE_ppa010885mg Prunus persica PRUPE_ppa010885mg I 0.000
POPTR_0015s03760 Populus trichocarpa POPTR_0015s03760 I 0.000
POPTR_0012s05210 Populus trichocarpa POPTR_0012s05210 I 0.000
Lus10009034.g Linum usitatissimum Lus10009034.g I 0.000
AMTR_s00079p00137860 Amborella trichopoda AMTR_s00079p00137860 I 0.000
GLYMA09G31580 Glycine max GLYMA09G31580 I 0.000
Lus10009673.g Linum usitatissimum Lus10009673.g I 0.000
Thhalv10008517m.g Eutrema salsugineum Thhalv10008517m.g N 0.000
Lus10038939.g Linum usitatissimum Lus10038939.g N 0.000
Thhalv10019010m.g Eutrema salsugineum Thhalv10019010m.g N 0.000
evm.TU.supercontig_3.503 Carica papaya evm.TU.supercontig_3.503 N 0.000
chr4.CM0042.750.nc Lotus japonicus chr4.CM0042.750.nc N 0.000
MDP0000779358 Malus domestica MDP0000779358 N 0.000
Carubv10020802m.g Capsella rubella Carubv10020802m.g N 0.000
GLYMA08G04661 Glycine max GLYMA08G04661 N 0.000
GLYMA05G35060 Glycine max GLYMA05G35060 N 0.000
BEE3 Arabidopsis lyrata fgenesh2_kg.2__1650__AT1G73830.1 N 0.000
fgenesh1_pm.C_scaffold_1001571 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001571 N 0.000
Bra025910 Brassica rapa Bra025910 N 0.000
Bra008113 Brassica rapa Bra008113 N 0.000
Bo6g118140 Brassica oleracea Bo6g118140 N 0.000
Bo5g025360 Brassica oleracea Bo5g025360 N 0.000
Bo2g080780 Brassica oleracea Bo2g080780 N 0.000
BEE3 Arabidopsis thaliana AT1G73830 N 0.000
GLYMA17G34010 Glycine max GLYMA17G34010 N 0.000
Bra015960 Brassica rapa Bra015960 N 0.000
Carubv10010961m.g Capsella rubella Carubv10010961m.g N 0.000
Carubv10009894m.g Capsella rubella Carubv10009894m.g N 0.000
Cagra.2231s0025 Capsella grandiflora Cagra.2231s0025 N 0.000
Cagra.0909s0019 Capsella grandiflora Cagra.0909s0019 N 0.000
Cagra.0876s0016 Capsella grandiflora Cagra.0876s0016 N 0.000
Bostr.7128s0442 Boechera stricta Bostr.7128s0442 N 0.000
Bostr.3288s0027 Boechera stricta Bostr.3288s0027 N 0.000
cassava32072.m1 Manihot esculenta cassava32072.m1 N 0.000
Solyc03g119390.2 Solanum lycopersicum Solyc03g119390.2 N 0.000
PGSC0003DMG400005725 Solanum tuberosum PGSC0003DMG400005725 N 0.000
BEE1 Arabidopsis thaliana AT1G18400 N 0.000