tbx6 (Danio rerio)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSDARG00000011785 T339765_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including regulation of skeletal muscle tissue development; somatic motor neuron differentiation; and somitogenesis. Located in chromatin. Is expressed in several structures, including margin; mesoderm; presumptive mesoderm; tail bud; and trunk. Human ortholog(s) of this gene implicated in spondylocostal dysostosis. Orthologous to human TBX6 (T-box transcription factor 6). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000015108 T-box 64 243

Links

Other T-box family TFs
Other Danio rerio TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSORLG00000006272 Oryzias latipes ENSORLG00000006272 N 0.853
ENSTRUG00000008789 Takifugu rubripes ENSTRUG00000008789 N 0.843
tbx6 Tetraodon nigroviridis ENSTNIG00000015212 N 0.843
ENSPFOG00000004756 Poecilia formosa ENSPFOG00000004756 N 0.842
ENSXMAG00000013802 Xiphophorus maculatus ENSXMAG00000013802 N 0.832
ENSONIG00000011439 Oreochromis niloticus ENSONIG00000011439 N 0.827