TBX10 (Homo sapiens)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSG00000167800 T339899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN

NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.858 0.885
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA

TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.858 0.885
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT

AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.858 0.885
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.858 0.885
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA

TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.858 0.885
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA

TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.858 0.885
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV

BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.858 0.885
Tbx1
M11386_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.858 0.885
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN

NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.858 0.885
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000335191 T-box 67 252

Links

Other T-box family TFs
Other Homo sapiens TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.000
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.000
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.000
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.000
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.000
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.000
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.000
TCM_040735 Theobroma cacao TCM_040735 N 0.000
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.000
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.000
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.000
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.000
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.000
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.000
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.000
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.000
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.000
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.000
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.000
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.000
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.000
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.000
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.000
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.000
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.000
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.000
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.000
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.000
GLYMA02G35080 Glycine max GLYMA02G35080 N 0.000
GLYMA02G35048 Glycine max GLYMA02G35048 N 0.000
GLYMA02G30990 Glycine max GLYMA02G30990 N 0.000
Bra022434 Brassica rapa Bra022434 N 0.000
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.000
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.000
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.000
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.000
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.000
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.000
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.000
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.000
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.000
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.000
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.000
Bo5g113750 Brassica oleracea Bo5g113750 N 0.000