TBX6 (Gallus gallus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSGALG00000006374 T339923_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.751 0.619
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.751 0.619
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.751 0.619
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.750 0.624
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.750 0.624
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.750 0.624
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.750 0.624
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.750 0.624
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.750 0.624
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.750 0.624
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.750 0.624
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.750 0.624
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.750 0.624
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.750 0.624
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.750 0.624
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.750 0.624
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.750 0.624
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.750 0.619
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.750 0.619
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.750 0.619
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.737 0.613
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.737 0.613
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.737 0.613
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.737 0.613
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.737 0.613
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.737 0.613
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.737 0.613
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.737 0.613
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.737 0.613
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000010286 T-box 29 209

Links

Other T-box family TFs
Other Gallus gallus TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TTAC_0000939701 Hydatigera taeniaeformis TTAC_0000939701 N 0.000
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.000
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.000
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.000
Smp_100090 Schistosoma mansoni Smp_100090 N 0.000
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.000
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.000
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.000
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.000
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.000
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.000
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.000
AABR07040480.1 Rattus norvegicus ENSRNOG00000057407 N 0.000
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.000
AABR07040430.1 Rattus norvegicus ENSRNOG00000056486 N 0.000
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N 0.000
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.000
AABR07041586.2 Rattus norvegicus ENSRNOG00000052769 N 0.000
AAC59859 Xenopus laevis AAC59859 N 0.000
AAH44009 Xenopus laevis AAH44009 N 0.000
TsM_000746700 Taenia solium TsM_000746700 N 0.000
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.000
T265_10726 Opisthorchis viverrini T265_10726 N 0.000
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.000
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.000
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.000
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.000
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.000
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.000
HNAJ_0000227501 Hymenolepis nana HNAJ_0000227501 N 0.000
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.000
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.000
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.000
csin112095 Clonorchis sinensis csin112095 N 0.000
A_00070 Schistosoma haematobium A_00070 N 0.000
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.000
AAH73449 Xenopus laevis AAH73449 N 0.000
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.000
AABR07030543.1 Rattus norvegicus ENSRNOG00000051634 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.000
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.000
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.000
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.000
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.000
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.000
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N 0.000
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.000
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.000
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.000
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.000
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.000
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.000
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.000
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.000
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.000
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.000
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.000
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.000
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.000
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N 0.000
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.000
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.000
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N 0.000
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.000
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.000
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.000
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.000
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.000
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.000
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.000
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.000
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.000
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.000
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.000
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.000
HMGB1 Bos taurus ENSBTAG00000014862 N 0.000