TBX6 (Gallus gallus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSGALG00000006374 T339923_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.751 0.619
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.751 0.619
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.751 0.619
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.750 0.624
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.750 0.624
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.750 0.624
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.750 0.624
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.750 0.624
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.750 0.624
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.750 0.624
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.750 0.624
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.750 0.624
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.750 0.624
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.750 0.624
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.750 0.624
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.750 0.624
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.750 0.624
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.750 0.619
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.750 0.619
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.750 0.619
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.737 0.613
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.737 0.613
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.737 0.613
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.737 0.613
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.737 0.613
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.737 0.613
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.737 0.613
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.737 0.613
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.737 0.613
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000010286 T-box 29 209

Links

Other T-box family TFs
Other Gallus gallus TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010903 Aedes aegypti AAEL010903 N 0.000
AAH41216 Xenopus laevis AAH41216 N 0.000
AALB002196 Anopheles albimanus AALB002196 N 0.000
AARA006951 Anopheles arabiensis AARA006951 N 0.000
AATE020748 Anopheles atroparvus AATE020748 N 0.000
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.000
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.000
ACEP21543 Atta cephalotes ACEP21543 N 0.000
ACHR000824 Anopheles christyi ACHR000824 N 0.000
ACOM023536 Anopheles coluzzii ACOM023536 N 0.000
ACUA002517 Anopheles culicifacies ACUA002517 N 0.000
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.000
ADAC004863 Anopheles darlingi ADAC004863 N 0.000
ADIR010513 Anopheles dirus ADIR010513 N 0.000
AEPI007457 Anopheles epiroticus AEPI007457 N 0.000
AFAF004631 Anopheles farauti AFAF004631 N 0.000
AFUN008276 Anopheles funestus AFUN008276 N 0.000
AGAP001994 Anopheles gambiae AGAP001994 N 0.000
AMAM007470 Anopheles maculatus AMAM007470 N 0.000
AMEC010472 Anopheles melas AMEC010472 N 0.000
AMEM015770 Anopheles merus AMEM015770 N 0.000
AMIN003302 Anopheles minimus AMIN003302 N 0.000
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.000
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.000
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.000
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.000
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.000
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.000
ASIS021704 Anopheles sinensis ASIS021704 N 0.000
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.000
A_05744 Schistosoma haematobium A_05744 N 0.000
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.000
Bm7076 Brugia malayi Bm7076 N 0.000
CapteG156119 Capitella teleta CapteG156119 N 0.000
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.000
CLEC001104 Cimex lectularius CLEC001104 N 0.000
CLEC007658 Cimex lectularius CLEC007658 N 0.000
CLEC009203 Cimex lectularius CLEC009203 N 0.000
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.000
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.000
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.000
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.000
csin103376 Clonorchis sinensis csin103376 N 0.000
D918_01415 Trichuris suis D918_01415 N 0.000
dalao Drosophila melanogaster FBgn0030093 N 0.000
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.000
DILT_0001977801 Diphyllobothrium latum DILT_0001977801 N 0.000
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.000
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.000
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.000
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.000
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.000
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.000
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.000
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.000
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.000
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.000
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.000
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.000
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.000
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.000
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.000
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.000
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.000
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.000
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.000
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.000
GB50847 Apis mellifera GB50847 N 0.000
GD16931 Drosophila simulans FBgn0188511 N 0.000
GE15824 Drosophila yakuba FBgn0233388 N 0.000
GF19131 Drosophila ananassae FBgn0096142 N 0.000
GG18291 Drosophila erecta FBgn0110507 N 0.000
GH12291 Drosophila grimshawi FBgn0119770 N 0.000
GI15536 Drosophila mojavensis FBgn0138285 N 0.000
GJ14880 Drosophila virilis FBgn0202084 N 0.000
GK25765 Drosophila willistoni FBgn0227724 N 0.000
GL26801 Drosophila persimilis FBgn0164382 N 0.000
GM13722 Drosophila sechellia FBgn0168653 N 0.000
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.000
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.000
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.000
HelroG188630 Helobdella robusta HelroG188630 N 0.000
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.000
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.000
HMEL010720 Heliconius melpomene HMEL010720 N 0.000
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.000
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.000
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.000
ISCW021016 Ixodes scapularis ISCW021016 N 0.000
KGM_12870 Danaus plexippus KGM_12870 N 0.000
L798_00593 Zootermopsis nevadensis L798_00593 N 0.000
LCUP013669 Lucilia cuprina LCUP013669 N 0.000
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.000
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.000
LOAG_01279 Loa loa LOAG_01279 N 0.000
LotgiG111061 Lottia gigantea LotgiG111061 N 0.000
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.000
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.000
MDOA009352 Musca domestica MDOA009352 N 0.000
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.000
Minc14081 Meloidogyne incognita Minc14081 N 0.000
ML45008a Mnemiopsis leidyi ML45008a N 0.000
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.000
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.000
NECAME_16117 Necator americanus NECAME_16117 N 0.000
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.000
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.000
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.000
NV11999 Nasonia vitripennis NV11999 N 0.000
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.000
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.000
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.000
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.000
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.000
RSKR_0000347900 Rhabditophanes kr3021 RSKR_0000347900 N 0.000
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.000
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.000
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.000
SMAR004982 Strigamia maritima SMAR004982 N 0.000
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.000
smarce1 Oryzias latipes ENSORLG00000018629 N 0.000
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.000
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.000
Smp_154640 Schistosoma mansoni Smp_154640 N 0.000
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.000
SMU15003232 Schmidtea mediterranea SMU15003232 N 0.000
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.000
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.000
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.000
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.000
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.000
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.000
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.000
T265_02983 Opisthorchis viverrini T265_02983 N 0.000
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.000
TC007745 Tribolium castaneum TC007745 N 0.000
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.000
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.000
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.000
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.000
TsM_000047400 Taenia solium TsM_000047400 N 0.000
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.000
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.000
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.000
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.000
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.000
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.000