ENSGALG00000008250 (Gallus gallus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSGALG00000008250 T339924_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.920 0.978
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.920 0.978
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.920 0.978
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.920 0.978
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.920 0.978
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.906 0.950
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.906 0.950
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.906 0.950
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.906 0.950
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.906 0.950
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.906 0.950
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.906 0.950
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.906 0.950
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.875 0.945
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.875 0.939
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.840 0.867
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.819 0.713
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.797 0.657
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.797 0.657
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.797 0.657
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.797 0.657
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.797 0.657
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.797 0.657
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.797 0.657
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.797 0.657
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.797 0.657
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.794 0.718
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.783 0.657
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.783 0.657
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.783 0.657
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000013415 T-box 107 287

Links

Other T-box family TFs
Other Gallus gallus TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g06169 Acanthocheilonema viteae nAv.1.0.1.g06169 I 0.000
Alligator_sinensis_CCG020374.1 Alligator sinensis Alligator_sinensis_CCG020374.1 I 0.000
ANCCAN_29852 Ancylostoma caninum ANCCAN_29852 I 0.000
ANCCEY_10108 Ancylostoma ceylanicum ANCCEY_10108 I 0.000
ANCDUO_21978 Ancylostoma duodenale ANCDUO_21978 I 0.000
ACAC_0000529401 Angiostrongylus cantonensis ACAC_0000529401 I 0.000
ACOC_0001130401 Angiostrongylus costaricensis ACOC_0001130401 I 0.000
ENSACAG00000016280 Anolis carolinensis ENSACAG00000016280 I 0.000
ASU_07002 Ascaris suum ASU_07002 I 0.000
ENSAMXG00000014504 Astyanax mexicanus ENSAMXG00000014504 I 0.000
ENSBTAP00000017584-D1 Bos grunniens ENSBTAP00000017584-D1 I 0.000
ENSBTAG00000013213 Bos taurus ENSBTAG00000013213 I 0.000
Bm9236 Brugia malayi Bm9236 I 0.000
BTMF_0000075201 Brugia timori BTMF_0000075201 I 0.000
CBN15373 Caenorhabditis brenneri CBN15373 I 0.000
CBG14844 Caenorhabditis briggsae CBG14844 I 0.000
odd-2 Caenorhabditis elegans WBGene00003846 D 0.000
CJA04579 Caenorhabditis japonica CJA04579 I 0.000
CRE25083 Caenorhabditis remanei CRE25083 I 0.000
CRE00192 Caenorhabditis remanei CRE00192 I 0.000
ENSCPOG00000020572 Cavia porcellus ENSCPOG00000020572 I 0.000
ENSCSAG00000012312 Chlorocebus sabaeus ENSCSAG00000012312 I 0.000
ENSCING00000006616 Ciona intestinalis ENSCING00000006616 I 0.000
CGI_10012022 Crassostrea gigas CGI_10012022 I 0.000
osr2 Danio rerio ENSDARG00000038006 I 0.000
DICVIV_08037 Dictyocaulus viviparus DICVIV_08037 I 0.000
DME_0000745901 Dracunculus medinensis DME_0000745901 I 0.000
EEL_0000443001 Elaeophora elaphi EEL_0000443001 I 0.000
EVEC_0001078501 Enterobius vermicularis EVEC_0001078501 I 0.000
ENSFCAG00000014220 Felis catus ENSFCAG00000014220 I 0.000
ENSGMOG00000016368 Gadus morhua ENSGMOG00000016368 I 0.000
osr2 Gasterosteus aculeatus ENSGACG00000003524 I 0.000
Gfo_R006005 Geospiza fortis Gfo_R006005 I 0.000
GPUH_0001513701 Gongylonema pulchrum GPUH_0001513701 I 0.000
HCOI00889400 Haemonchus contortus HCOI00889400 I 0.000
HPLM_0001493201 Haemonchus placei HPLM_0001493201 I 0.000
OSR2 Homo sapiens ENSG00000164920 D 0.000
ENSSTOG00000021263 Ictidomys tridecemlineatus ENSSTOG00000021263 I 0.000
ENSLOCG00000009790 Lepisosteus oculatus ENSLOCG00000009790 I 0.000
nLs.2.1.2.g06827 Litomosoides sigmodontis nLs.2.1.2.g06827 I 0.000
LOAG_00579 Loa loa LOAG_00579 I 0.000
LotgiG130661 Lottia gigantea LotgiG130661 I 0.000
ENSLAFG00000009420 Loxodonta africana ENSLAFG00000009420 I 0.000
ENSMPUG00000015246 Mustela putorius furo ENSMPUG00000015246 I 0.000
Osr2 Mus musculus ENSMUSG00000022330 D 0.000
ENSMLUG00000013412 Myotis lucifugus ENSMLUG00000013412 I 0.000
NECAME_08408 Necator americanus NECAME_08408 I 0.000
NBR_0000990501 Nippostrongylus brasiliensis NBR_0000990501 I 0.000
nOo.2.0.1.g01159 Onchocerca ochengi nOo.2.0.1.g01159 I 0.000
WBGene00239217 Onchocerca volvulus WBGene00239217 I 0.000
Ogr10172 Ophisaurus gracilis Ogr10172 I 0.000
ENSOCUG00000022383 Oryctolagus cuniculus ENSOCUG00000022383 I 0.000
ENSPANG00000012764 Papio anubis ENSPANG00000012764 I 0.000
ENSPSIG00000011787 Pelodiscus sinensis ENSPSIG00000011787 I 0.000
ENSPFOG00000012273 Poecilia formosa ENSPFOG00000012273 I 0.000
scaffold395-EXSNAP2012.4 Pristionchus exspectatus scaffold395-EXSNAP2012.4 I 0.000
Ppa-odd-1 Pristionchus pacificus PPA09938 I 0.000
Osr2 Rattus norvegicus ENSRNOG00000011136 I 0.000
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.000
OSR2 Sus scrofa ENSSSCG00000006073 I 0.000
SMUV_0000818001 Syphacia muris SMUV_0000818001 I 0.000
ENSTGUG00000012027 Taeniopygia guttata ENSTGUG00000012027 I 0.000
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.000
osr2 Tetraodon nigroviridis ENSTNIG00000013301 I 0.000
TCNE_0000229401 Toxocara canis TCNE_0000229401 I 0.000
osr2.S Xenopus laevis XB-GENE-6254720 I 0.000
osr2.L Xenopus laevis XB-GENE-864802 I 0.000
ENSXMAG00000002498 Xiphophorus maculatus ENSXMAG00000002498 I 0.000