ENSLOCG00000003838 (Lepisosteus oculatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSLOCG00000003838 T340010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
T
M05809_2.00
Homo sapiens
NANGTGYGAHWWNTVRCACCTN

NAGGTGYBANWWDTCRCACNTN
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1
0.801 0.892
T
M05810_2.00
Homo sapiens
DTCRCAYVTABGTGYGAH

DTCRCACVTABRTGYGAH
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2
0.801 0.892
T
M09427_2.00
Homo sapiens
BYNVCANNNVDGTGWKARDN

NHYTMWCACHBNNNTGBNRV
Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A
0.801 0.892
T
M11384_2.00
Homo sapiens
MKHBTSACACSTAGGTGTGAAATK

MATTTCACACCTASGTGTSAVDMK
Transfac
Matys et al.(2006)
V$BRACH_01
0.801 0.892
T
M05811_2.00
Homo sapiens
NABGTGYGAHWWNTVRCACSTN

NASGTGYBANWWDTCRCACVTN
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1
0.801 0.892
T
M05812_2.00
Homo sapiens
DTMRCAYVTABGTGYKAH

DTMRCACVTABRTGYKAH
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2
0.801 0.892
T
M09431_2.00
Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN

NTKNVCABHDRNSTGTSAAWTYNBB
Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B
0.801 0.886
T
M09651_2.00
Mus musculus
NYTVDCASNNNNSTGHBARNN

NNYTVDCASNNNNSTGHBARN
Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963
0.801 0.886
TBX19
M03562_2.00
Homo sapiens
NDTVRCACVTANGTGYKANN

NNTMRCACNTABGTGYBAHN
SELEX
Jolma et al.(2013)
TBX19_1
0.796 0.801
TBX19
M05803_2.00
Homo sapiens
NAGGTGYBAHWDTMRCACNTN

NANGTGYKAHWDTVRCACCTN
SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX
0.796 0.801
TBX19
M05804_2.00
Homo sapiens
NANGTGYKAHWDTVRCACSTN

NASGTGYBAHWDTMRCACNTN
SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX
0.796 0.801
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000004587 T-box 45 220

Links

Other T-box family TFs
Other Lepisosteus oculatus TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000735101 Angiostrongylus costaricensis ACOC_0000735101 N 0.000
ANCCEY_08318 Ancylostoma ceylanicum ANCCEY_08318 N 0.000
ASU_12421 Ascaris suum ASU_12421 N 0.000
Bm4516 Brugia malayi Bm4516 N 0.000
BTMF_0000196601 Brugia timori BTMF_0000196601 N 0.000
BXY_0943600 Bursaphelenchus xylophilus BXY_0943600 N 0.000
CBG12652 Caenorhabditis briggsae CBG12652 N 0.000
CBN08911 Caenorhabditis brenneri CBN08911 N 0.000
CBN31474 Caenorhabditis brenneri CBN31474 N 0.000
CJA17455 Caenorhabditis japonica CJA17455 N 0.000
CRE24738 Caenorhabditis remanei CRE24738 N 0.000
DICVIV_10160 Dictyocaulus viviparus DICVIV_10160 N 0.000
DME_0000611701 Dracunculus medinensis DME_0000611701 N 0.000
GPLIN_001183200 Globodera pallida GPLIN_001183200 N 0.000
HCOI01581600 Haemonchus contortus HCOI01581600 N 0.000
L596_g8102 Steinernema carpocapsae L596_g8102 N 0.000
L889_g21858 Steinernema feltiae L889_g21858 N 0.000
L892_g27212 Steinernema scapterisci L892_g27212 N 0.000
L893_g27569 Steinernema glaseri L893_g27569 N 0.000
L898_g616 Steinernema monticolum L898_g616 N 0.000
let-607 Caenorhabditis elegans WBGene00002783 N 0.000
LOAG_10644 Loa loa LOAG_10644 N 0.000
nAv.1.0.1.g00516 Acanthocheilonema viteae nAv.1.0.1.g00516 N 0.000
nDi.2.2.2.g01644 Dirofilaria immitis nDi.2.2.2.g01644 N 0.000
NECAME_02209 Necator americanus NECAME_02209 N 0.000
PTRK_0000278100 Parastrongyloides trichosuri PTRK_0000278100 N 0.000
PTRK_0001321400 Parastrongyloides trichosuri PTRK_0001321400 N 0.000
RSKR_0000919500 Rhabditophanes kr3021 RSKR_0000919500 N 0.000
SPAL_0001235900 Strongyloides papillosus SPAL_0001235900 N 0.000
SPAL_0001311500 Strongyloides papillosus SPAL_0001311500 N 0.000
SSTP_0000575300 Strongyloides stercoralis SSTP_0000575300 N 0.000
SVE_0150100 Strongyloides venezuelensis SVE_0150100 N 0.000
SVE_0362500 Strongyloides venezuelensis SVE_0362500 N 0.000
WUBG_03758 Wuchereria bancrofti WUBG_03758 N 0.000