CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000006550
(
Lepisosteus oculatus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSLOCG00000006550
T340013_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.788
0.669
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.738
0.680
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.737
0.619
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN
NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.737
0.619
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.736
0.608
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.736
0.608
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.736
0.608
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA
TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.736
0.608
TBX5
M11374_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.736
0.608
TBX5
M11375_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.736
0.608
Tbx5
M11387_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.736
0.608
TBX5
M11376_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.736
0.608
TBX5
M11377_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.736
0.608
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000007916
T-box
32
212
MSLEDSDLWKSFHELGTEMIITKPGRRMFPHCKITLSGLLPYAKYIILVDMVPVDGFRYKWNKDRWEVAGKAEPQPPCRTYLHPDSPAPGSHWMKQPVSFLKLKLTNNTLDQHGHIILHSMHRYQPRFHVVQADDLFSVRWSVFQTFTFPETIFTAVTAYQNGKITKLKIDHNPFAKGFRE
Links
Other
T-box
family TFs
Other
Lepisosteus oculatus
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
tbx16
Danio rerio
ENSDARG00000007329
I
0.877
ENSAMXG00000001195
Astyanax mexicanus
ENSAMXG00000001195
I
0.868
ENSPFOG00000017869
Poecilia formosa
ENSPFOG00000017869
I
0.846
ENSXMAG00000008530
Xiphophorus maculatus
ENSXMAG00000008530
I
0.844
tbx16
Oryzias latipes
ENSORLG00000014344
I
0.843
tbx16
Takifugu rubripes
ENSTRUG00000016468
I
0.840
tbx16
Gasterosteus aculeatus
ENSGACG00000012454
I
0.836
ENSONIG00000003732
Oreochromis niloticus
ENSONIG00000003732
I
0.824
vegt
Xenopus tropicalis
XB-GENE-1033829
I
0.822
BAH04512
Xenopus tropicalis
BAH04512
I
0.822
BAH04511
Xenopus tropicalis
BAH04511
I
0.822
ENSLACG00000012884
Latimeria chalumnae
ENSLACG00000012884
I
0.819
vegt.S
Xenopus laevis
XB-GENE-1033836
N
0.813
ENSONIG00000011030
Oreochromis niloticus
ENSONIG00000011030
I
0.811
vegt.L
Xenopus laevis
XB-GENE-6252142
N
0.806
tbx16
Tetraodon nigroviridis
ENSTNIG00000011487
N
0.788
estExt_fgenesh2_pg.C_1570024
Branchiostoma floridae
estExt_fgenesh2_pg.C_1570024
D
0.788
estExt_fgenesh2_pg.C_1570035
Branchiostoma floridae
estExt_fgenesh2_pg.C_1570035
I
0.788
Alligator_sinensis_CCG014169.1
Alligator sinensis
Alligator_sinensis_CCG014169.1
N
0.770
TBX6
Gallus gallus
ENSGALG00000006374
I
0.768
TBX6
Meleagris gallopavo
ENSMGAG00000007663
I
0.768
ENSAPLG00000006398
Anas platyrhynchos
ENSAPLG00000006398
I
0.768
NEMVEDRAFT_v1g102530
Nematostella vectensis
NEMVEDRAFT_v1g102530
I
0.766
ENSACAG00000008612
Anolis carolinensis
ENSACAG00000008612
N
0.765
ML45844a
Mnemiopsis leidyi
ML45844a
I
0.764
ENSGMOG00000011095
Gadus morhua
ENSGMOG00000011095
N
0.763
CGI_10016324
Crassostrea gigas
CGI_10016324
I
0.762
Afo_R009018
Aptenodytes forsteri
Afo_R009018
I
0.760
Aan_R008261
Calypte anna
Aan_R008261
I
0.760
CGI_10005914
Crassostrea gigas
CGI_10005914
I
0.760
Ocbimv22029974m.g
Octopus bimaculoides
Ocbimv22029974m.g
I
0.760
CapteG152028
Capitella teleta
CapteG152028
I
0.760
Tal_R011807
Tyto alba
Tal_R011807
I
0.760
Gfo_R008747
Geospiza fortis
Gfo_R008747
I
0.760
Cmyd_10005826
Chelonia mydas
Cmyd_10005826
I
0.760
TBX6
Taeniopygia guttata
ENSTGUG00000010188
I
0.760
ENSFALG00000007252
Ficedula albicollis
ENSFALG00000007252
I
0.760
Brh_R011905
Buceros rhinoceros
Brh_R011905
I
0.760
D918_00588
Trichuris suis
D918_00588
I
0.758
TMUE_s0121001900
Trichuris muris
TMUE_s0121001900
I
0.758
TTRE_0000604401
Trichuris trichiura
TTRE_0000604401
I
0.758
LotgiG117095
Lottia gigantea
LotgiG117095
I
0.758
HNAJ_0001193901
Hymenolepis nana
HNAJ_0001193901
I
0.757
HelroG71638
Helobdella robusta
HelroG71638
I
0.755
HelroG63904
Helobdella robusta
HelroG63904
I
0.752
T265_05725
Opisthorchis viverrini
T265_05725
I
0.749
CapteG110717
Capitella teleta
CapteG110717
I
0.749
D917_09589
Trichinella nativa
D917_09589
I
0.749
EFV62265
Trichinella spiralis
EFV62265
I
0.749
csin107221
Clonorchis sinensis
csin107221
I
0.749
LotgiG117236
Lottia gigantea
LotgiG117236
I
0.745
fgenesh2_pg.scaffold_89000016
Branchiostoma floridae
fgenesh2_pg.scaffold_89000016
I
0.745
ENSXMAG00000000486
Xiphophorus maculatus
ENSXMAG00000000486
I
0.744
tbx2b
Tetraodon nigroviridis
ENSTNIG00000010765
I
0.742
SMU15026199
Schmidtea mediterranea
SMU15026199
I
0.742
DAPPUDRAFT_13272
Daphnia pulex
DAPPUDRAFT_13272
I
0.741
ACYPI000143
Acyrthosiphon pisum
ACYPI000143
I
0.739
GA22741
Drosophila pseudoobscura
FBgn0244144
I
0.739
GE16345
Drosophila yakuba
FBgn0233875
I
0.739
GK15734
Drosophila willistoni
FBgn0217737
I
0.739
bi
Drosophila virilis
FBgn0020983
I
0.739
GL14298
Drosophila persimilis
FBgn0151903
I
0.739
GM12345
Drosophila sechellia
FBgn0167282
I
0.739
bi
Drosophila melanogaster
FBgn0000179
I
0.739
TBX3
Monodelphis domestica
ENSMODG00000012059
I
0.739
tetur33g01070
Tetranychus urticae
tetur33g01070
I
0.739
RSKR_0001075800
Rhabditophanes kr3021
RSKR_0001075800
I
0.738
ENSGMOG00000009107
Gadus morhua
ENSGMOG00000009107
I
0.738
XP_001195863
Strongylocentrotus purpuratus
XP_001195863
D
0.738
ENSGMOG00000012645
Gadus morhua
ENSGMOG00000012645
I
0.737
ENSLACG00000015364
Latimeria chalumnae
ENSLACG00000015364
I
0.737
ENSGMOG00000002896
Gadus morhua
ENSGMOG00000002896
I
0.737
tbx2b
Danio rerio
ENSDARG00000006120
I
0.737
ENSAMXG00000001528
Astyanax mexicanus
ENSAMXG00000001528
I
0.737
Pvit_13524
Pogona vitticeps
Pvit_13524
I
0.737
TBX2
Gasterosteus aculeatus
ENSGACG00000013575
D
0.737
ENSPFOG00000016384
Poecilia formosa
ENSPFOG00000016384
I
0.737
tbx5b
Tetraodon nigroviridis
ENSTNIG00000015908
I
0.737
ENSONIG00000010454
Oreochromis niloticus
ENSONIG00000010454
I
0.737
TBX2
Takifugu rubripes
ENSTRUG00000008297
D
0.737
TBX2
Oryzias latipes
ENSORLG00000014792
I
0.737
ENSXMAG00000005715
Xiphophorus maculatus
ENSXMAG00000005715
I
0.737
tbx3.L
Xenopus laevis
XB-GENE-6252891
I
0.736
ENSBTAP00000015125-D1
Bos grunniens
ENSBTAP00000015125-D1
I
0.736
Cmyd_10018097
Chelonia mydas
Cmyd_10018097
I
0.736
tbx3
Xenopus tropicalis
XB-GENE-1018231
I
0.736
Sakowv30012255m.g
Saccoglossus kowalevskii
Sakowv30012255m.g
I
0.736
Alligator_sinensis_CCG008096.1
Alligator sinensis
Alligator_sinensis_CCG008096.1
I
0.736
Ogr05323
Ophisaurus gracilis
Ogr05323
I
0.736
Myotis_brandtii_TBX5_10028219
Myotis brandtii
Myotis_brandtii_TBX5_10028219
I
0.736
ENSP00000384152
Macaca fascicularis
ENSP00000384152
I
0.736
tbx3.S
Xenopus laevis
XB-GENE-1018237
I
0.736
TBX5
Pan troglodytes
ENSPTRG00000005496
I
0.736
TBX5
Homo sapiens
ENSG00000089225
D
0.736
TBX5
Felis catus
ENSFCAG00000005574
I
0.736
ENSFALG00000007778
Ficedula albicollis
ENSFALG00000007778
I
0.736
TBX5
Gallus gallus
ENSGALG00000008253
I
0.736
TBX5
Gorilla gorilla
ENSGGOG00000013775
I
0.736
ENSLACG00000002339
Latimeria chalumnae
ENSLACG00000002339
I
0.736
ENSGMOG00000011740
Gadus morhua
ENSGMOG00000011740
I
0.736
TBX5
Equus caballus
ENSECAG00000017114
I
0.736
TBX5
Dasypus novemcinctus
ENSDNOG00000025303
I
0.736
TBX5
Canis familiaris
ENSCAFG00000009189
I
0.736
TBX5
Bos taurus
ENSBTAG00000011384
I
0.736
ENSAMEG00000001112
Ailuropoda melanoleuca
ENSAMEG00000001112
I
0.736
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.736
TBX5
Cavia porcellus
ENSCPOG00000014558
I
0.736
tbx5a
Danio rerio
ENSDARG00000024894
I
0.736
ENSCSAG00000002347
Chlorocebus sabaeus
ENSCSAG00000002347
I
0.736
TBX5
Loxodonta africana
ENSLAFG00000010125
I
0.736
TBX5
Meleagris gallopavo
ENSMGAG00000010075
I
0.736
tbx5a
Oryzias latipes
ENSORLG00000007339
I
0.736
TBX5
Tursiops truncatus
ENSTTRG00000000980
I
0.736
TBX5
Sus scrofa
ENSSSCG00000009867
I
0.736
ENSPANG00000016891
Papio anubis
ENSPANG00000016891
I
0.736
ENSPPYG00000004994
Pongo abelii
ENSPPYG00000004994
I
0.736
ENSPFOG00000019824
Poecilia formosa
ENSPFOG00000019824
I
0.736
TBX5
Otolemur garnettii
ENSOGAG00000016204
I
0.736
TBX5
Oryctolagus cuniculus
ENSOCUG00000012715
I
0.736
TBX5
Macaca mulatta
ENSMMUG00000016202
I
0.736
TBX5
Myotis lucifugus
ENSMLUG00000016530
I
0.736
ENSMPUG00000002715
Mustela putorius furo
ENSMPUG00000002715
I
0.736
Tbx5
Mus musculus
ENSMUSG00000018263
D
0.736
ENSXMAG00000005348
Xiphophorus maculatus
ENSXMAG00000005348
I
0.736
ENSOARG00000006614
Ovis aries
ENSOARG00000006614
I
0.736
Tbx5
Rattus norvegicus
ENSRNOG00000001399
I
0.736
ENSONIG00000001919
Oreochromis niloticus
ENSONIG00000001919
I
0.735
tbx2b
Gasterosteus aculeatus
ENSGACG00000020309
I
0.735
Smp_145230
Schistosoma mansoni
Smp_145230
I
0.735
tbx2b
Oryzias latipes
ENSORLG00000010011
I
0.735