CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX2
(
Oryctolagus cuniculus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSOCUG00000023498
T340216_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN
NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.738
0.982
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.738
0.982
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN
NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.738
0.982
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN
NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.738
0.982
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.738
0.982
TBX2
M11381_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.738
0.982
TBX2
M11382_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.738
0.982
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN
NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.738
0.982
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000022236
T-box
1
165
TGVVLTKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRD
Links
Other
T-box
family TFs
Other
Oryctolagus cuniculus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000005940
Chlorocebus sabaeus
ENSCSAG00000005940
I
0.863
Tbx2
Rattus norvegicus
ENSRNOG00000003517
I
0.863
ENSPPYG00000008798
Pongo abelii
ENSPPYG00000008798
I
0.863
ENSBTAP00000018970-D1
Bos grunniens
ENSBTAP00000018970-D1
N
0.845
TBX2
Felis catus
ENSFCAG00000008993
N
0.845
ENSOARG00000016407
Ovis aries
ENSOARG00000016407
N
0.845
ENSMMUP00000012907
Macaca fascicularis
ENSMMUP00000012907
I
0.814
TBX2
Gorilla gorilla
ENSGGOG00000009144
I
0.814
TBX2
Canis familiaris
ENSCAFG00000017745
I
0.814
TBX2
Callithrix jacchus
ENSCJAG00000001256
I
0.814
HelroG77782
Helobdella robusta
HelroG77782
N
0.792
ENSPFOG00000021683
Poecilia formosa
ENSPFOG00000021683
N
0.776
ENSPSIG00000006299
Pelodiscus sinensis
ENSPSIG00000006299
N
0.772
ENSCSAG00000005933
Chlorocebus sabaeus
ENSCSAG00000005933
I
0.759
ISCW019283
Ixodes scapularis
ISCW019283
N
0.755
PHUM322730
Pediculus humanus
PHUM322730
N
0.749
HelroG156909
Helobdella robusta
HelroG156909
N
0.740
Alligator_sinensis_CCG002051.1
Alligator sinensis
Alligator_sinensis_CCG002051.1
I
0.738
Ogr11256
Ophisaurus gracilis
Ogr11256
I
0.738
Pvit_13524
Pogona vitticeps
Pvit_13524
I
0.738
tbx2
Xenopus tropicalis
XB-GENE-1018115
I
0.738
ENSPSIG00000017536
Pelodiscus sinensis
ENSPSIG00000017536
I
0.738
TBX2
Ochotona princeps
ENSOPRG00000012183
I
0.738
TBX2
Tursiops truncatus
ENSTTRG00000004541
I
0.738
ENSSTOG00000009350
Ictidomys tridecemlineatus
ENSSTOG00000009350
I
0.738
TBX2
Sus scrofa
ENSSSCG00000027060
I
0.738
ENSSHAG00000012290
Sarcophilus harrisii
ENSSHAG00000012290
I
0.738
TBX2
Pan troglodytes
ENSPTRG00000009489
I
0.738
Tbx2
Mus musculus
ENSMUSG00000000093
D
0.738
ENSGALG00000023577
Gallus gallus
ENSGALG00000023577
I
0.738
ENSLACG00000015364
Latimeria chalumnae
ENSLACG00000015364
I
0.738
TBX2
Loxodonta africana
ENSLAFG00000006596
I
0.738
TBX2
Homo sapiens
ENSG00000121068
D
0.738
ENSFALG00000005458
Ficedula albicollis
ENSFALG00000005458
I
0.738
TBX2
Bos taurus
ENSBTAG00000014278
I
0.738
ENSCPOG00000001042
Cavia porcellus
ENSCPOG00000001042
I
0.738
tbx2a
Danio rerio
ENSDARG00000018025
I
0.738
TBX2
Otolemur garnettii
ENSOGAG00000014815
I
0.738
ENSLOCG00000005074
Lepisosteus oculatus
ENSLOCG00000005074
I
0.738
tbx2.L
Xenopus laevis
XB-GENE-1018122
I
0.738
ENSNLEG00000000423
Nomascus leucogenys
ENSNLEG00000000423
I
0.738
ENSAMEG00000008826
Ailuropoda melanoleuca
ENSAMEG00000008826
I
0.738
ENSMEUG00000010232
Macropus eugenii
ENSMEUG00000010232
I
0.738
ENSMPUG00000015118
Mustela putorius furo
ENSMPUG00000015118
I
0.738
TBX2
Microcebus murinus
ENSMICG00000016649
I
0.738
TBX2
Myotis lucifugus
ENSMLUG00000011673
I
0.738
TBX2
Monodelphis domestica
ENSMODG00000014204
I
0.738
ENSMMUG00000009859
Macaca mulatta
ENSMMUG00000009859
I
0.738
ENSAMXG00000001528
Astyanax mexicanus
ENSAMXG00000001528
I
0.736
tbx2b
Danio rerio
ENSDARG00000006120
I
0.736
ENSOANG00000020395
Ornithorhynchus anatinus
ENSOANG00000020395
I
0.532
SMRZ_0000901601
Schistosoma margrebowiei
SMRZ_0000901601
I
0.230
SCUD_0001668701
Schistosoma curassoni
SCUD_0001668701
I
0.230