ENSPFOG00000022507 (Poecilia formosa)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSPFOG00000022507 T340344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.878 0.951
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.878 0.951
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.878 0.951
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.864 0.912
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.864 0.912
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.864 0.912
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.864 0.912
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.864 0.912
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.864 0.912
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.864 0.912
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.864 0.912
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.864 0.912
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.770 0.632
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.770 0.632
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.770 0.632
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.770 0.632
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.770 0.632
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.770 0.632
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.770 0.632
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.770 0.632
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.768 0.615
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.768 0.615
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.768 0.615
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.768 0.615
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.768 0.615
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.758 0.648
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.757 0.610
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.737 0.610
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.737 0.610
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.737 0.643
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000026799 T-box 55 237

Links

Other T-box family TFs
Other Poecilia formosa TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1Q1_02234 Trichosporon asahii A1Q1_02234 I 0.000
ACRE_010220 Acremonium chrysogenum ACRE_010220 I 0.000
AMAG_13560 Allomyces macrogynus AMAG_13560 I 0.000
AMAG_13812 Allomyces macrogynus AMAG_13812 I 0.000
ATEG_07814 Aspergillus terreus CADATEAG00001961 I 0.000
AUEXF2481DRAFT_28704 Aureobasidium subglaciale AUEXF2481DRAFT_28704 I 0.000
BN946_scf184796.g4 Trametes cinnabarina BN946_scf184796.g4 I 0.000
BOTBODRAFT_182611 Botryobasidium botryosum BOTBODRAFT_182611 I 0.000
CC1G_07415 Coprinopsis cinerea CC1G_07415 I 0.000
CERSUDRAFT_114103 Ceriporiopsis subvermispora CERSUDRAFT_114103 I 0.000
CND03290 Cryptococcus neoformans CND03290 I 0.000
CPUR_08669 Claviceps purpurea CPUR_08669 I 0.000
CY34DRAFT_54046 Suillus luteus CY34DRAFT_54046 I 0.000
DACRYDRAFT_48176 Dacryopinax sp DACRYDRAFT_48176 I 0.000
DI09_24p280 Microsporidia sp DI09_24p280 N 0.000
EDP44549.1 Malassezia globosa EDP44549.1 I 0.000
estExt_fgenesh1_pg.C_120063 Sporobolomyces roseus estExt_fgenesh1_pg.C_120063 I 0.000
estExt_fgeneshPB_pg.C_250119 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_250119 I 0.000
EURHEDRAFT_381770 Aspergillus ruber EURHEDRAFT_381770 I 0.000
fgeneshMC_pg.10_#_374 Mucor circinelloides fgeneshMC_pg.10_#_374 I 0.000
fgeneshMC_pg.11_#_166 Mucor circinelloides fgeneshMC_pg.11_#_166 I 0.000
fgeneshPB_pg.4__282 Phycomyces blakesleeanus fgeneshPB_pg.4__282 I 0.000
fgeneshTM_pg.1_#_1734 Tremella mesenterica fgeneshTM_pg.1_#_1734 I 0.000
FIBRA_08626 Fibroporia radiculosa FIBRA_08626 I 0.000
FOMPIDRAFT_1123646 Fomitopsis pinicola FOMPIDRAFT_1123646 I 0.000
GALMADRAFT_123329 Galerina marginata GALMADRAFT_123329 I 0.000
GLOINDRAFT_349601 Rhizophagus irregularis GLOINDRAFT_349601 I 0.000
GLOTRDRAFT_21409 Gloeophyllum trabeum GLOTRDRAFT_21409 I 0.000
gwh2.6.574.1 Phanerochaete chrysosporium gwh2.6.574.1 I 0.000
HETIRDRAFT_248206 Heterobasidion irregulare HETIRDRAFT_248206 I 0.000
J056_003714 Wallemia ichthyophaga J056_003714 I 0.000
JAAARDRAFT_97747 Jaapia argillacea JAAARDRAFT_97747 I 0.000
K437DRAFT_221438 Tilletiaria anomala K437DRAFT_221438 N 0.000
K443DRAFT_676702 Laccaria amethystina K443DRAFT_676702 I 0.000
L804_00322 Cryptococcus gattii L804_00322 I 0.000
LELG_00868 Lodderomyces elongisporus LELG_00868 I 0.000
M378DRAFT_52467 Amanita muscaria M378DRAFT_52467 I 0.000
M404DRAFT_68462 Pisolithus tinctorius M404DRAFT_68462 I 0.000
M407DRAFT_54328 Tulasnella calospora M407DRAFT_54328 I 0.000
M408DRAFT_66182 Serendipita vermifera M408DRAFT_66182 I 0.000
M413DRAFT_24434 Hebeloma cylindrosporum M413DRAFT_24434 I 0.000
MAC_08141 Metarhizium acridum MAC_08141 I 0.000
MAJ_00916 Metarhizium majus MAJ_00916 I 0.000
MAM_05750 Metarhizium album MAM_05750 I 0.000
MANI_001834 Metarhizium anisopliae MANI_001834 I 0.000
MBR_03191 Metarhizium brunneum MBR_03191 I 0.000
MGU_03004 Metarhizium guizhouense MGU_03004 I 0.000
Moror_8992 Moniliophthora roreri Moror_8992 I 0.000
MSY001_2604 Malassezia sympodialis MSY001_2604 I 0.000
MVLG_01455 Microbotryum violaceum MVLG_01455 I 0.000
O9G_001320 Rozella allomycis O9G_001320 I 0.000
PaG_02568 Pseudozyma aphidis PaG_02568 N 0.000
PAS_chr3_0766 Komagataella pastoris PAS_chr3_0766 I 0.000
PAXRUDRAFT_147875 Paxillus rubicundulus PAXRUDRAFT_147875 I 0.000
PFL1_05889 Pseudozyma flocculosa PFL1_05889 I 0.000
PHACADRAFT_54766 Phanerochaete carnosa PHACADRAFT_54766 I 0.000
PHLGIDRAFT_43379 Phlebiopsis gigantea PHLGIDRAFT_43379 I 0.000
php2 Schizosaccharomyces pombe SPBC725.11c I 0.000
PHSY_003968 Pseudozyma hubeiensis PHSY_003968 N 0.000
PIIN_00087 Piriformospora indica PIIN_00087 I 0.000
PILCRDRAFT_824094 Piloderma croceum PILCRDRAFT_824094 I 0.000
PISMIDRAFT_40699 Pisolithus microcarpus PISMIDRAFT_40699 I 0.000
PLEOSDRAFT_1027012 Pleurotus ostreatus PLEOSDRAFT_1027012 I 0.000
POSPLDRAFT_42451 Postia placenta POSPLDRAFT_42451 I 0.000
PSEUBRA_SCAF2g02687 Pseudozyma brasiliensis PSEUBRA_SCAF2g02687 N 0.000
RHTO_00634 Rhodosporidium toruloides RHTO_00634 I 0.000
RO3G_00980 Rhizopus oryzae RO3G_00980 I 0.000
RO3G_16178 Rhizopus oryzae RO3G_16178 I 0.000
RTG_01693 Rhodotorula glutinis RTG_01693 I 0.000
S40285_00742 Stachybotrys chlorohalonata S40285_00742 I 0.000
S40288_04573 Stachybotrys chartarum S40288_04573 I 0.000
SCHCODRAFT_110229 Schizophyllum commune SCHCODRAFT_110229 I 0.000
SCLCIDRAFT_62922 Scleroderma citrinum SCLCIDRAFT_62922 I 0.000
SERLA73DRAFT_72938 Serpula lacrymans SERLA73DRAFT_72938 I 0.000
SJAG_00698 Schizosaccharomyces japonicus SJAG_00698 I 0.000
SOCG_03424 Schizosaccharomyces octosporus SOCG_03424 I 0.000
SPOG_04316 Schizosaccharomyces cryophilus SPOG_04316 I 0.000
SPPG_06102 Spizellomyces punctatus SPPG_06102 I 0.000
TRIATDRAFT_259021 Trichoderma atroviride TRIATDRAFT_259021 I 0.000
TRIREDRAFT_124286 Trichoderma reesei TRIREDRAFT_124286 I 0.000
TRIVIDRAFT_175433 Trichoderma virens TRIVIDRAFT_175433 I 0.000
UHOR_02364 Ustilago hordei UHOR_02364 N 0.000
UM01597 Ustilago maydis UM01597 N 0.000
UV8b_4419 Ustilaginoidea virens UV8b_4419 I 0.000
V565_064680 Rhizoctonia solani V565_064680 I 0.000
VHEMI02644 Torrubiella hemipterigena VHEMI02644 I 0.000
WALSEDRAFT_57633 Wallemia sebi WALSEDRAFT_57633 I 0.000
X797_004191 Metarhizium robertsii X797_004191 I 0.000
XP_002492996.1 Pichia pastoris XP_002492996.1 I 0.000