ENSPMAG00000003745 (Petromyzon marinus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSPMAG00000003745 T340348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA

TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.800 0.947
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT

AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.800 0.947
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND

HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.800 0.947
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR

YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.800 0.947
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA

TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.800 0.947
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA

TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.800 0.947
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN

NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.800 0.947
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN

NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.800 0.947
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM

KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.800 0.947
TBX20
M11385_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.800 0.947
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA

TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.800 0.947
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH

DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.800 0.947
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN

NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.800 0.947
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA

TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.800 0.947
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN

NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.800 0.941
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN

NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.800 0.941
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN

NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.800 0.941
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000004070 T-box 1 174

Links

Other T-box family TFs
Other Petromyzon marinus TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI008613 Acyrthosiphon pisum ACYPI008613 I 0.741
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.792
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.787
ENSCSAG00000009676 Chlorocebus sabaeus ENSCSAG00000009676 I 0.737
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.800
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.799
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.800
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.795
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.792
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.795
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.800
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.800
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.800
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.798
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.794
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.800
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.798
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.800
ENSPANG00000025136 Papio anubis ENSPANG00000025136 I 0.773
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.794
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.800
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.800
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.800
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.794
e_gw.90.81.1 Branchiostoma floridae e_gw.90.81.1 I 0.754
GL25845 Drosophila persimilis FBgn0163429 I 0.820
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.800
Ocbimv22004458m.g Octopus bimaculoides Ocbimv22004458m.g I 0.735
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.786
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.800
Pvit_12384 Pogona vitticeps Pvit_12384 I 0.747
Pvit_16634 Pogona vitticeps Pvit_16634 I 0.745
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.773
SMAR008438 Strigamia maritima SMAR008438 I 0.738
TBX18 Ornithorhynchus anatinus ENSOANG00000000556 I 0.773
TBX18 Homo sapiens ENSG00000112837 D 0.773
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.800
TBX20 Sorex araneus ENSSARG00000003223 I 0.770
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.794
TBX20 Sus scrofa ENSSSCG00000016662 I 0.799
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.794
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.794
TBX20 Bos taurus ENSBTAG00000017541 I 0.799
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.800
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.799
TBX20 Canis familiaris ENSCAFG00000028536 I 0.804
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.800
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.800
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.800
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.800
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.800
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.800
TBX20 Echinops telfairi ENSETEG00000012771 I 0.800
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.800
TBX20 Felis catus ENSFCAG00000013004 I 0.800
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.800
TBX20 Homo sapiens ENSG00000164532 D 0.800
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.794
TBX20 Equus caballus ENSECAG00000018182 I 0.800
Tbx20 Mus musculus ENSMUSG00000031965 D 0.800
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.800
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.800
tbx20 Ciona intestinalis ENSCING00000005267 I 0.757
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.800
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.800
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.800
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.800
tbx20 Danio rerio ENSDARG00000005150 I 0.795
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.800
tbx20.L Xenopus laevis XB-GENE-865696 I 0.794
tbx22 Danio rerio ENSDARG00000091748 I 0.755