CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX20
(
Pteropus vampyrus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSPVAG00000010267
T340414_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.718
1.000
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.718
1.000
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.718
1.000
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.718
1.000
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.718
1.000
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.718
1.000
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.718
1.000
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.718
1.000
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.718
1.000
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.718
1.000
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.718
1.000
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.718
1.000
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.718
1.000
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.718
1.000
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000009680
T-box
103
275
CSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLXXX
ENSPVAP00000017051
T-box
103
275
CSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLXXX
Links
Other
T-box
family TFs
Other
Pteropus vampyrus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000008381
Ictidomys tridecemlineatus
ENSSTOG00000008381
I
0.920
Gfo_R007656
Geospiza fortis
Gfo_R007656
N
0.898
Aan_R004837
Calypte anna
Aan_R004837
N
0.898
ISCW019692
Ixodes scapularis
ISCW019692
N
0.797
TsM_000926000
Taenia solium
TsM_000926000
N
0.780
SMRZ_0000665201
Schistosoma margrebowiei
SMRZ_0000665201
N
0.770
Tbx5
Mus musculus
ENSMUSG00000018263
D
0.769
ENSMEUG00000005348
Macropus eugenii
ENSMEUG00000005348
N
0.758
PPAI002089
Phlebotomus papatasi
PPAI002089
N
0.750
tbx18
Takifugu rubripes
ENSTRUG00000001419
I
0.749
TBX15
Bos taurus
ENSBTAG00000007767
I
0.743
TBX20
Pan troglodytes
ENSPTRG00000019076
I
0.718
ENSPPYG00000017641
Pongo abelii
ENSPPYG00000017641
I
0.718
ENSPSIG00000016149
Pelodiscus sinensis
ENSPSIG00000016149
I
0.718
TBX20
Taeniopygia guttata
ENSTGUG00000005375
I
0.718
Myotis_brandtii_Tbx20_10020109
Myotis brandtii
Myotis_brandtii_Tbx20_10020109
I
0.718
ENSP00000386170
Macaca fascicularis
ENSP00000386170
I
0.718
ENSPANG00000007074
Papio anubis
ENSPANG00000007074
I
0.718
ENSSHAG00000016356
Sarcophilus harrisii
ENSSHAG00000016356
I
0.718
Tbx20
Rattus norvegicus
ENSRNOG00000016181
I
0.718
TBX20
Oryctolagus cuniculus
ENSOCUG00000007422
I
0.718
TBX20
Echinops telfairi
ENSETEG00000012771
I
0.718
TBX20
Felis catus
ENSFCAG00000013004
I
0.718
TBX20
Homo sapiens
ENSG00000164532
D
0.718
TBX20
Erinaceus europaeus
ENSEEUG00000010135
I
0.718
TBX20
Equus caballus
ENSECAG00000018182
I
0.718
TBX20
Callithrix jacchus
ENSCJAG00000012232
I
0.718
ENSCSAG00000014936
Chlorocebus sabaeus
ENSCSAG00000014936
I
0.718
TBX20
Dasypus novemcinctus
ENSDNOG00000004142
I
0.718
TBX20
Gorilla gorilla
ENSGGOG00000026618
I
0.718
TBX20
Loxodonta africana
ENSLAFG00000012790
I
0.718
ENSMPUG00000007865
Mustela putorius furo
ENSMPUG00000007865
I
0.718
ENSNLEG00000001606
Nomascus leucogenys
ENSNLEG00000001606
I
0.718
TBX20
Otolemur garnettii
ENSOGAG00000010338
I
0.718
TBX20
Monodelphis domestica
ENSMODG00000000085
I
0.718
TBX20
Macaca mulatta
ENSMMUG00000012549
I
0.718
TBX20
Meleagris gallopavo
ENSMGAG00000012040
I
0.718
TBX20
Myotis lucifugus
ENSMLUG00000015517
I
0.718
TBX20
Ochotona princeps
ENSOPRG00000013626
I
0.718