Tbx10 (Rattus norvegicus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSRNOG00000017944 T340433_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell fate specification and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human TBX10 (T-box transcription factor 10). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx1
M00832_2.00 		Mus musculus
NRGTGTGAANN
NNTTCACACYN		 PBM
Weirauch et al.(2013)
pTH3822 		0.858 0.885
TBX1
M03570_2.00 		Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT		 SELEX
Jolma et al.(2013)
TBX1_1 		0.858 0.885
TBX1
M03571_2.00 		Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT		 SELEX
Jolma et al.(2013)
TBX1_2 		0.858 0.885
TBX1
M03572_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX1_3 		0.858 0.885
TBX1
M03573_2.00 		Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR		 SELEX
Jolma et al.(2013)
TBX1_4 		0.858 0.885
TBX1
M03574_2.00 		Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR		 SELEX
Jolma et al.(2013)
TBX1_5 		0.858 0.885
TBX1
M05821_2.00 		Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV		 SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX 		0.858 0.885
Tbx1
M11386_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX1_07 		0.858 0.885
TBX1
M05822_2.00 		Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH		 SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX 		0.858 0.885
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000024129 T-box 26 211

Links

Other T-box family TFs
Other Rattus norvegicus TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Tbx10 Mus musculus ENSMUSG00000037477 I 0.912
Tbx10 Dipodomys ordii ENSDORG00000010070 I 0.912
ENSSTOG00000011629 Ictidomys tridecemlineatus ENSSTOG00000011629 I 0.912
ENSMMUG00000018529 Macaca mulatta ENSMMUG00000018529 I 0.910
TBX10 Gorilla gorilla ENSGGOG00000011961 I 0.910
ENSCSAG00000008726 Chlorocebus sabaeus ENSCSAG00000008726 I 0.910
ENSPANG00000006501 Papio anubis ENSPANG00000006501 I 0.910
ENSP00000335191 Macaca fascicularis ENSP00000335191 I 0.910
TBX10 Homo sapiens ENSG00000167800 I 0.910
TBX10 Otolemur garnettii ENSOGAG00000000784 I 0.908
TBX10 Felis catus ENSFCAG00000001760 I 0.902
TBX10 Canis familiaris ENSCAFG00000011264 I 0.902
ENSMPUG00000004076 Mustela putorius furo ENSMPUG00000004076 I 0.902
ENSMEUG00000007568 Macropus eugenii ENSMEUG00000007568 I 0.902
ENSAMEG00000001098 Ailuropoda melanoleuca ENSAMEG00000001098 I 0.902
Myotis_brandtii_Tbx10_10030825 Myotis brandtii Myotis_brandtii_Tbx10_10030825 I 0.901
ENSBTAP00000015683-D1 Bos grunniens ENSBTAP00000015683-D1 I 0.901
TBX10 Pteropus vampyrus ENSPVAG00000008592 I 0.901
TBX10 Pan troglodytes ENSPTRG00000003972 I 0.897
TBX10 Procavia capensis ENSPCAG00000009585 I 0.888
TBX10 Monodelphis domestica ENSMODG00000021334 I 0.886
TBX10 Bos taurus ENSBTAG00000011816 I 0.873
TBX1 Otolemur garnettii ENSOGAG00000003596 I 0.861
tbx1 Xenopus tropicalis XB-GENE-478084 I 0.860
ENSFALG00000008041 Ficedula albicollis ENSFALG00000008041 I 0.860
ENSONIG00000015827 Oreochromis niloticus ENSONIG00000015827 I 0.860
tbx1.L Xenopus laevis XB-GENE-478088 I 0.860
tbx1.S Xenopus laevis XB-GENE-6254396 I 0.860
ENSPFOG00000009540 Poecilia formosa ENSPFOG00000009540 I 0.860
ENSPFOG00000009621 Poecilia formosa ENSPFOG00000009621 I 0.860
tbx1 Tetraodon nigroviridis ENSTNIG00000016767 I 0.860
tbx1 Takifugu rubripes ENSTRUG00000014017 I 0.860
TBX1 Taeniopygia guttata ENSTGUG00000008395 I 0.860
Pvit_15846 Pogona vitticeps Pvit_15846 I 0.860
tbx1 Danio rerio ENSDARG00000031891 I 0.860
TBX1 Monodelphis domestica ENSMODG00000021176 I 0.860
tbx1 Oryzias latipes ENSORLG00000015256 I 0.860
ENSLACG00000016333 Latimeria chalumnae ENSLACG00000016333 I 0.860
ENSAMXG00000020444 Astyanax mexicanus ENSAMXG00000020444 I 0.860
tbx1 Gasterosteus aculeatus ENSGACG00000013057 I 0.860
ENSMEUG00000011624 Macropus eugenii ENSMEUG00000011624 I 0.860
ENSGMOG00000018613 Gadus morhua ENSGMOG00000018613 I 0.860
ENSMGAG00000004357 Meleagris gallopavo ENSMGAG00000004357 I 0.859
ENSSTOG00000004505 Ictidomys tridecemlineatus ENSSTOG00000004505 I 0.858
ENSGGOG00000009181 Gorilla gorilla ENSGGOG00000009181 I 0.858
TBX1 Homo sapiens ENSG00000184058 D 0.858
ENSP00000331791-D2 Bos grunniens ENSP00000331791-D2 I 0.858
TBX1 Dasypus novemcinctus ENSDNOG00000035422 I 0.858
TBX1 Callithrix jacchus ENSCJAG00000014591 I 0.858
Tbx1 Rattus norvegicus ENSRNOG00000001892 I 0.858
ENSCSAG00000011818 Chlorocebus sabaeus ENSCSAG00000011818 I 0.858
Tbx1 Mus musculus ENSMUSG00000009097 D 0.858
ENSFCAG00000005446 Felis catus ENSFCAG00000005446 I 0.858
ENSPANG00000015763 Papio anubis ENSPANG00000015763 I 0.858
TBX1 Loxodonta africana ENSLAFG00000021555 I 0.858
Ogr08509 Ophisaurus gracilis Ogr08509 I 0.854
Pvit_16222 Pogona vitticeps Pvit_16222 I 0.854
ENSACAG00000008549 Anolis carolinensis ENSACAG00000008549 I 0.851
SMAR009230 Strigamia maritima SMAR009230 I 0.851
ENSLACG00000004994 Latimeria chalumnae ENSLACG00000004994 I 0.848
Aan_R010744 Calypte anna Aan_R010744 I 0.846
ENSTGUG00000007382 Taeniopygia guttata ENSTGUG00000007382 I 0.845
ENSOARG00000013751 Ovis aries ENSOARG00000013751 I 0.845
PHUM607490 Pediculus humanus PHUM607490 I 0.844
ENSGALG00000003599 Gallus gallus ENSGALG00000003599 I 0.843
L798_01101 Zootermopsis nevadensis L798_01101 I 0.841
fgenesh2_kg.scaffold_118000001 Branchiostoma floridae fgenesh2_kg.scaffold_118000001 I 0.837
ENSMPUG00000003900 Mustela putorius furo ENSMPUG00000003900 I 0.836
DAPPUDRAFT_3881 Daphnia pulex DAPPUDRAFT_3881 I 0.834
ACYPI001903 Acyrthosiphon pisum ACYPI001903 I 0.833
CapteG226618 Capitella teleta CapteG226618 I 0.826
LotgiG104372 Lottia gigantea LotgiG104372 I 0.824
Alligator_sinensis_CCG022145.1 Alligator sinensis Alligator_sinensis_CCG022145.1 I 0.824
GB55445 Apis mellifera GB55445 I 0.823
Myotis_brandtii_Tbx1_10021844 Myotis brandtii Myotis_brandtii_Tbx1_10021844 I 0.821
YQE_10853 Dendroctonus ponderosae YQE_10853 I 0.819
tetur04g00890 Tetranychus urticae tetur04g00890 I 0.816
Hsal_04471--XP_624689.2_APIME Harpegnathos saltator Hsal_04471--XP_624689.2_APIME I 0.814
Cflo_09868--XP_624689.2_APIME Camponotus floridanus Cflo_09868--XP_624689.2_APIME I 0.814
NV11904 Nasonia vitripennis NV11904 I 0.811
CGI_10008753 Crassostrea gigas CGI_10008753 I 0.808
TC015327 Tribolium castaneum TC015327 I 0.805
LDEC008541 Leptinotarsa decemlineata LDEC008541 I 0.805
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I 0.803
Sakowv30001714m.g Saccoglossus kowalevskii Sakowv30001714m.g I 0.802
CLEC006885 Cimex lectularius CLEC006885 I 0.799
TBX1 Procavia capensis ENSPCAG00000010176 I 0.795
Gfo_R011877 Geospiza fortis Gfo_R011877 I 0.791
KGM_08622 Danaus plexippus KGM_08622 I 0.787
HMEL015536 Heliconius melpomene HMEL015536 I 0.787
BGIBMGA013132 Bombyx mori BGIBMGA013132 I 0.776
TBX10 Tursiops truncatus ENSTTRG00000003781 N 0.766
NEMVEDRAFT_v1g214571 Nematostella vectensis NEMVEDRAFT_v1g214571 I 0.763
MDOA001403 Musca domestica MDOA001403 I 0.759
LLOJ005386 Lutzomyia longipalpis LLOJ005386 I 0.757
ENSPFOG00000007309 Poecilia formosa ENSPFOG00000007309 I 0.753
AMEC007874 Anopheles melas AMEC007874 I 0.751
AMAM012836 Anopheles maculatus AMAM012836 I 0.751
AMEM018425 Anopheles merus AMEM018425 I 0.751
AQUA006531 Anopheles quadriannulatus AQUA006531 I 0.751
AFUN001113 Anopheles funestus AFUN001113 I 0.751
ASIS010497 Anopheles sinensis ASIS010497 I 0.751
AMIN000536 Anopheles minimus AMIN000536 I 0.751
AALB002686 Anopheles albimanus AALB002686 I 0.751
CPIJ007784 Culex quinquefasciatus CPIJ007784 I 0.751
CpipJ_CPIJ007784 Culex pipiens CpipJ_CPIJ007784 I 0.751
AAEL018165 Aedes aegypti AAEL018165 I 0.751
AARA001806 Anopheles arabiensis AARA001806 I 0.751
AATE015045 Anopheles atroparvus AATE015045 I 0.751
AEPI001144 Anopheles epiroticus AEPI001144 I 0.751
ADIR010556 Anopheles dirus ADIR010556 I 0.751
ACUA026816 Anopheles culicifacies ACUA026816 I 0.751
AFAF008331 Anopheles farauti AFAF008331 I 0.751