Tbx6 (Rattus norvegicus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSRNOG00000019771 T340435_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX6
M05805_2.00
Homo sapiens
NRSGTGTBAN

NTVACACSYN
SELEX
Yin et al.(2017)
TBX6_eDBD_HT-SELEX
0.884 0.956
TBX6
M05806_2.00
Homo sapiens
NTVRCACBHN

NDVGTGYBAN
SELEX
Yin et al.(2017)
TBX6_eDBD_Methyl-HT-SELEX
0.884 0.956
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000060687 T-box 93 273

Links

Other T-box family TFs
Other Rattus norvegicus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Tbx6 Mus musculus ENSMUSG00000030699 I 0.920
TBX6 Cavia porcellus ENSCPOG00000021165 I 0.915
TBX6 Oryctolagus cuniculus ENSOCUG00000026026 I 0.915
ENSSTOG00000000869 Ictidomys tridecemlineatus ENSSTOG00000000869 I 0.915
TBX6 Otolemur garnettii ENSOGAG00000011659 I 0.912
TBX6 Gorilla gorilla ENSGGOG00000012924 I 0.912
TBX6 Macaca mulatta ENSMMUG00000000981 I 0.912
ENSPANG00000000556 Papio anubis ENSPANG00000000556 I 0.912
TBX6 Microcebus murinus ENSMICG00000009134 I 0.912
ENSPPYG00000007242 Pongo abelii ENSPPYG00000007242 I 0.912
ENSNLEG00000002044 Nomascus leucogenys ENSNLEG00000002044 I 0.912
TBX6 Callithrix jacchus ENSCJAG00000035904 I 0.912
TBX6 Pan troglodytes ENSPTRG00000007985 I 0.912
ENSCSAG00000006175 Chlorocebus sabaeus ENSCSAG00000006175 I 0.912
Myotis_brandtii_TBX6_10014444 Myotis brandtii Myotis_brandtii_TBX6_10014444 I 0.902
ENSOARG00000004040 Ovis aries ENSOARG00000004040 I 0.902
TBX6 Myotis lucifugus ENSMLUG00000011244 I 0.902
ENSBTAP00000011919-D1 Bos grunniens ENSBTAP00000011919-D1 I 0.899
ENSMPUG00000012586 Mustela putorius furo ENSMPUG00000012586 I 0.899
ENSEEUG00000012843 Erinaceus europaeus ENSEEUG00000012843 I 0.899
TBX6 Equus caballus ENSECAG00000022374 I 0.899
TBX6 Loxodonta africana ENSLAFG00000017884 I 0.899
TBX6 Bos taurus ENSBTAG00000009046 I 0.899
TBX6 Procavia capensis ENSPCAG00000000071 I 0.897
TBX6 Echinops telfairi ENSETEG00000019233 I 0.894
TBX6 Monodelphis domestica ENSMODG00000015682 I 0.890
TBX6 Felis catus ENSFCAG00000014172 I 0.889
TBX6 Ochotona princeps ENSOPRG00000009784 I 0.889
TBX6 Homo sapiens ENSG00000149922 D 0.884
TBX6 Pteropus vampyrus ENSPVAG00000010556 I 0.869
TBX6 Tursiops truncatus ENSTTRG00000005534 I 0.843
T265_12717 Opisthorchis viverrini T265_12717 I 0.737
csin100383 Clonorchis sinensis csin100383 I 0.737
CapteG163410 Capitella teleta CapteG163410 I 0.736