GH16540 (Drosophila grimshawi)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 FBgn0124011 T340662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD

HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.883 0.923
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN

NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.883 0.923
Doc2
M03992_2.00
Drosophila melanogaster
DRGGTGTBAN

NTVACACCYH
SELEX
Nitta et al.(2015)
Doc2_1
0.839 0.856
Doc2
M03993_2.00
Drosophila melanogaster
NAGGTGTBAN

NTVACACCTN
SELEX
Nitta et al.(2015)
Doc2_2
0.839 0.856
Doc2
M06454_2.00
Drosophila melanogaster
ARGYGTGAA

TTCACRCYT
B1H
Zhu et al.(2011)
Doc2_SANGER_5_FBgn0035956
0.839 0.856
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.751 0.602
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.741 0.586
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.741 0.586
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.741 0.586
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.741 0.586
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.741 0.586
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.741 0.586
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.741 0.586
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.741 0.586
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.741 0.586
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.741 0.586
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.741 0.586
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.741 0.586
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.741 0.586
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0150446 T-box 64 244

Links

Other T-box family TFs
Other Drosophila grimshawi TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Doc2 Drosophila melanogaster FBgn0035956 D 0.839
TBX2 Homo sapiens ENSG00000121068 D 0.741
TBX3 Homo sapiens ENSG00000135111 D 0.741
XP_001195863 Strongylocentrotus purpuratus XP_001195863 D 0.751
Doc3 Drosophila melanogaster FBgn0035954 D 0.883
Tbx3 Mus musculus ENSMUSG00000018604 D 0.741
Tbx2 Mus musculus ENSMUSG00000000093 D 0.741
GE21264 Drosophila yakuba FBgn0238533 I 0.831
GD14148 Drosophila simulans FBgn0185836 I 0.883
GD14149 Drosophila simulans FBgn0185837 I 0.864
GJ11695 Drosophila virilis FBgn0198949 I 0.861
GJ11697 Drosophila virilis FBgn0198951 I 0.873
GK12353 Drosophila willistoni FBgn0214363 I 0.864
TC012346 Tribolium castaneum TC012346 I 0.739
GK12279 Drosophila willistoni FBgn0214289 I 0.840
GK12352 Drosophila willistoni FBgn0214362 I 0.883
MESCA005219 Megaselia scalaris MESCA005219 I 0.847
HMEL012563 Heliconius melpomene HMEL012563 I 0.738
GE20800 Drosophila yakuba FBgn0238094 I 0.864
HelroG98030 Helobdella robusta HelroG98030 I 0.740
GE20799 Drosophila yakuba FBgn0238093 I 0.883
GM25113 Drosophila sechellia FBgn0179974 I 0.864
GH14955 Drosophila grimshawi FBgn0122430 I 0.848
GG15041 Drosophila erecta FBgn0107295 I 0.839
GG14369 Drosophila erecta FBgn0106628 I 0.864
GG14368 Drosophila erecta FBgn0106627 I 0.883
GF24375 Drosophila ananassae FBgn0101369 I 0.864
GF24374 Drosophila ananassae FBgn0101368 I 0.881
GF10130 Drosophila ananassae FBgn0087171 I 0.839
GA18721 Drosophila pseudoobscura FBgn0078721 I 0.839
GH16541 Drosophila grimshawi FBgn0124012 I 0.878
AMEC016175 Anopheles melas AMEC016175 I 0.797
GM25112 Drosophila sechellia FBgn0179973 I 0.883
GM24895 Drosophila sechellia FBgn0179757 I 0.839
GL15081 Drosophila persimilis FBgn0152685 I 0.839
GL15034 Drosophila persimilis FBgn0152638 I 0.864
GL15033 Drosophila persimilis FBgn0152637 I 0.883
GI13831 Drosophila mojavensis FBgn0136585 I 0.855
GI13829 Drosophila mojavensis FBgn0136583 I 0.868
GI11482 Drosophila mojavensis FBgn0134242 I 0.847
GA18682 Drosophila pseudoobscura FBgn0078682 I 0.864
Afo_R010397 Aptenodytes forsteri Afo_R010397 I 0.741
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.741
AATE019626 Anopheles atroparvus AATE019626 I 0.797
ACHR005948 Anopheles christyi ACHR005948 I 0.797
ACOM024997 Anopheles coluzzii ACOM024997 I 0.797
ACUA013605 Anopheles culicifacies ACUA013605 I 0.797
ADIR008855 Anopheles dirus ADIR008855 I 0.797
AEPI008783 Anopheles epiroticus AEPI008783 I 0.797
AFAF003219 Anopheles farauti AFAF003219 I 0.797
AFUN010103 Anopheles funestus AFUN010103 I 0.797
AMEM015129 Anopheles merus AMEM015129 I 0.797
AMIN011562 Anopheles minimus AMIN011562 I 0.797
AQUA010990 Anopheles quadriannulatus AQUA010990 I 0.797
ASIS012852 Anopheles sinensis ASIS012852 I 0.797
ASTEI02809 Anopheles stephensi ASTEI02809 I 0.797
MDOA003812 Musca domestica MDOA003812 I 0.825
MDOA006037 Musca domestica MDOA006037 I 0.849
MDOA015287 Musca domestica MDOA015287 I 0.852
ECANG7_07504 Echinococcus canadensis ECANG7_07504 I 0.738
AARA007626 Anopheles arabiensis AARA007626 I 0.797
AALB004781 Anopheles albimanus AALB004781 I 0.784
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I 0.741
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I 0.741
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I 0.741
ENSP00000257566 Macaca fascicularis ENSP00000257566 I 0.741
Gfo_R010838 Geospiza fortis Gfo_R010838 I 0.744
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I 0.741
Ogr02099 Ophisaurus gracilis Ogr02099 I 0.741
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.741
Pvit_16429 Pogona vitticeps Pvit_16429 I 0.741
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I 0.738
AAI57537 Xenopus tropicalis AAI57537 I 0.741
LCUP005945 Lucilia cuprina LCUP005945 I 0.849
LCUP005946 Lucilia cuprina LCUP005946 I 0.814
LCUP005947 Lucilia cuprina LCUP005947 I 0.856
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.741
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.741
tbx2.S Xenopus laevis XB-GENE-6255176 I 0.747
Hba_14542 Heterorhabditis bacteriophora Hba_14542 I 0.737
GA18655 Drosophila pseudoobscura FBgn0078655 I 0.883
CpipJ_CPIJ004922 Culex pipiens CpipJ_CPIJ004922 I 0.764
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I 0.741
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I 0.741
TBX2 Equus caballus ENSECAG00000024480 I 0.747
TBX3 Erinaceus europaeus ENSEEUG00000008506 I 0.741
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.741
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I 0.741
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I 0.741
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.741
TBX3 Gorilla gorilla ENSGGOG00000004238 I 0.741
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I 0.741
TBX3 Loxodonta africana ENSLAFG00000002948 I 0.741
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.741
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.741
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.741
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.741
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I 0.741
tbx3b Danio rerio ENSDARG00000061509 I 0.743
tbx2a Danio rerio ENSDARG00000018025 I 0.741
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I 0.741
AAEL004174 Aedes aegypti AAEL004174 I 0.848
AAEL013504 Aedes aegypti AAEL013504 I 0.780
ADAC005019 Anopheles darlingi ADAC005019 I 0.784
AGAP005895 Anopheles gambiae AGAP005895 I 0.797
AGAP005896 Anopheles gambiae AGAP005896 I 0.785
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.740
CPIJ004922 Culex quinquefasciatus CPIJ004922 I 0.764
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I 0.741
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.741
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I 0.741
TBX2 Bos taurus ENSBTAG00000014278 I 0.741
TBX3 Bos taurus ENSBTAG00000021706 I 0.741
TBX3 Canis familiaris ENSCAFG00000009216 I 0.741
TBX3 Callithrix jacchus ENSCJAG00000009716 I 0.741
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.741
TBX3 Cavia porcellus ENSCPOG00000003952 I 0.741
TBX3 Microcebus murinus ENSMICG00000010947 I 0.741
TBX2 Microcebus murinus ENSMICG00000016649 I 0.741
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I 0.741
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I 0.741
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.741
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.741
TBX3 Pan troglodytes ENSPTRG00000023749 I 0.741
Tbx3 Rattus norvegicus ENSRNOG00000008706 I 0.741
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I 0.741
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.741
TBX3 Sus scrofa ENSSSCG00000009865 I 0.741
TBX2 Sus scrofa ENSSSCG00000027060 I 0.741
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.741
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I 0.741
TBX3 Tupaia belangeri ENSTBEG00000014612 I 0.741
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.741
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I 0.741
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.741
Doc1 Drosophila melanogaster FBgn0028789 I 0.864
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.741
TBX3 Ochotona princeps ENSOPRG00000004462 I 0.741
TBX3 Myotis lucifugus ENSMLUG00000007567 I 0.741
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.741
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.741
TBX3 Macaca mulatta ENSMMUG00000015070 I 0.741
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.753
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.741
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I 0.741
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.741
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I 0.741
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.741
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I 0.741
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I 0.741
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I 0.741
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.741
TBX3 Otolemur garnettii ENSOGAG00000016212 I 0.741
ENSONIG00000011959 Oreochromis niloticus ENSONIG00000011959 I 0.745
TBX6 Ochotona princeps ENSOPRG00000009784 I 0.738
LDEC002078 Leptinotarsa decemlineata LDEC002078 N 0.735