LotgiG129911 (Lottia gigantea)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 LotgiG129911 T340806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A0A075Q982_PATMI
M00734_2.00
Patiria miniata
NAGGTGTBAN

NTVACACCTN
PBM
Cheatle-Jarvela et al.(2014)
PmTbr
0.803 0.670
SPU_025584
M00733_2.00
Strongylocentrotus purpuratus
RGGTGTGANN

NNTCACACCY
PBM
Cheatle-Jarvela et al.(2014)
SpTbr
0.800 0.693
Tbr1
M01028_2.00
Mus musculus
DTVRCAMNYH

DRNKTGYBAH
PBM
SebePedros et al.(2013)
pTH2659
0.766 0.687
TBR1
M03560_2.00
Homo sapiens
AGGTGTGAAN

NTTCACACCT
SELEX
Jolma et al.(2013)
TBR1_1
0.766 0.687
TBR1
M03561_2.00
Homo sapiens
RAGGTGTGAAH

DTTCACACCTY
SELEX
Jolma et al.(2013)
TBR1_2
0.766 0.687
Eomes
M00215_2.00
Mus musculus
RDGTGYBANN

NNTVRCACHY
PBM
Badis et al.(2009)
Eomes_0921
0.764 0.682
EOMES
M03563_2.00
Homo sapiens
DAGGTGTGAWNNN

NNNWTCACACCTH
SELEX
Jolma et al.(2013)
EOMES_1
0.764 0.676
EOMES
M03564_2.00
Homo sapiens
TVACACNTNNNDRNGTGTGA

TCACACNYHNNNANGTGTBA
SELEX
Jolma et al.(2013)
EOMES_2
0.764 0.676
EOMES
M02752_2.00
Homo sapiens
AGGTGTGAW

WTCACACCT
SELEX
Jolma et al.(2010)
EOMES_monomer
0.764 0.676
EOMES
M05807_2.00
Homo sapiens
DAGGTGTGAN

NTCACACCTH
SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX
0.764 0.676
EOMES
M09647_2.00
Homo sapiens
ARGTGWKAAN

NTTMWCACYT
Misc
Heinz et al.(2010)
H9-Eomes_GSE26097
0.764 0.676
EOMES
M05808_2.00
Homo sapiens
NABGTGYKAH

DTMRCACVTN
SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX
0.764 0.676
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP129911 T-box 15 197

Links

Other T-box family TFs
Other Lottia gigantea TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.813
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.813
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.803
SPU_025584 Strongylocentrotus purpuratus SPU_025584 D 0.800
CapteG223644 Capitella teleta CapteG223644 I 0.777
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.776
eomesb Oryzias latipes ENSORLG00000005393 I 0.776
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.775
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.775
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.775
tbr1a Danio rerio ENSDARG00000076259 I 0.775
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.774
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.772
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.768
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.766
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.766
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.766
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.766
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.766
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.766
Tbr1 Mus musculus ENSMUSG00000035033 D 0.766
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.766
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.766
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.766
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.766
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.766
tbr1b Oryzias latipes ENSORLG00000016828 I 0.766
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.766
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.766
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.766
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.766
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.766
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.766
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.766
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.766
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.766
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.766
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.766
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.766
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.766
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.766
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.766
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.766
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.766
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.766
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.766
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.766
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.766
TBR1 Bos taurus ENSBTAG00000021692 I 0.766
TBR1 Canis familiaris ENSCAFG00000009984 I 0.766
TBR1 Homo sapiens ENSG00000136535 D 0.766
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.766
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.766
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.766
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.766
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.764
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.764
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.764
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.764
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.764
EOMES Pan troglodytes ENSPTRG00000014705 I 0.764
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.764
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.764
EOMES Bos taurus ENSBTAG00000016920 I 0.764
tbr1b Danio rerio ENSDARG00000004712 I 0.764
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.764
EOMES Loxodonta africana ENSLAFG00000004142 I 0.764
EOMES Canis familiaris ENSCAFG00000005510 I 0.764
eomes.S Xenopus laevis XB-GENE-6487182 I 0.764
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.764
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.764
Eomes Dipodomys ordii ENSDORG00000016346 I 0.764
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.764
EOMES Cavia porcellus ENSCPOG00000004381 I 0.764
eomes Xenopus tropicalis XB-GENE-479769 I 0.764
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.764
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.764
EOMES Homo sapiens ENSG00000163508 D 0.764
EOMES Anolis carolinensis ENSACAG00000014201 I 0.764
TBR1 Felis catus ENSFCAG00000025073 I 0.764
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.764
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.764
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.764
Eomes Mus musculus ENSMUSG00000032446 D 0.764
EOMES Gallus gallus ENSGALG00000027247 I 0.764
EOMES Felis catus ENSFCAG00000003602 I 0.764
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.764
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.764
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.764
EOMES Procavia capensis ENSPCAG00000013650 I 0.764
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.764
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.764
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.764
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.763
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.763
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.763
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.761
EOMES Equus caballus ENSECAG00000021052 I 0.761
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.758
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.757
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.757
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.757
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.757
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.754
tbx21 Danio rerio ENSDARG00000004473 I 0.753
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.753
eomesb Gasterosteus aculeatus ENSGACG00000006345 I 0.744
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I 0.744
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I 0.744
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I 0.744
eomesa Takifugu rubripes ENSTRUG00000005361 I 0.744
ENSXMAG00000014284 Xiphophorus maculatus ENSXMAG00000014284 I 0.744
eomes.L Xenopus laevis XB-GENE-865305 I 0.742
AAI66068 Xenopus tropicalis AAI66068 I 0.741
eomesa Danio rerio ENSDARG00000006640 I 0.741
eomesa Gasterosteus aculeatus ENSGACG00000003160 I 0.741
eomesa Oryzias latipes ENSORLG00000002320 I 0.741
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I 0.741
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I 0.741
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I 0.741
eomesb Danio rerio ENSDARG00000104243 I 0.738
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.737
CapteG110717 Capitella teleta CapteG110717 I 0.735
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I 0.734
Brh_R007719 Buceros rhinoceros Brh_R007719 I 0.734