CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MESCA005219
(
Megaselia scalaris
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
MESCA005219
T340819_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.836
0.812
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.836
0.812
Doc2
M03992_2.00
Drosophila melanogaster
DRGGTGTBAN
NTVACACCYH
SELEX
Nitta et al.(2015)
Doc2_1
0.814
0.796
Doc2
M03993_2.00
Drosophila melanogaster
NAGGTGTBAN
NTVACACCTN
SELEX
Nitta et al.(2015)
Doc2_2
0.814
0.796
Doc2
M06454_2.00
Drosophila melanogaster
ARGYGTGAA
TTCACRCYT
B1H
Zhu et al.(2011)
Doc2_SANGER_5_FBgn0035956
0.814
0.796
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MESCA005219-PA
T-box
57
247
AKLENKELWRQFHEIGTEMIITKTGSLEEAANKRKCAYVSSMRLSVSGLKEDVNYCVMIEMVPITDCRYKFSGSHWVPAGGAEPQSPQRMYMHPESPALGSHWLNQPILFNKVKLTNNTLDNNGHIVLASMHKYQPRIHIIQTSDPTQIPWAPQQSFVFPETEFIAVTAYQNDRITKLKIDNNPFAKGFRE
Links
Other
T-box
family TFs
Other
Megaselia scalaris
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy