NEMVEDRAFT_v1g214570 (Nematostella vectensis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 NEMVEDRAFT_v1g214570 T340839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN

NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.737 0.781
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA

TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.737 0.781
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT

AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.737 0.781
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.737 0.781
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA

TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.737 0.781
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA

TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.737 0.781
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV

BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.737 0.781
Tbx1
M11386_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.737 0.781
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN

NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.737 0.781
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO35086 T-box 1 186

Links

Other T-box family TFs
Other Nematostella vectensis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NEMVEDRAFT_v1g214571 Nematostella vectensis NEMVEDRAFT_v1g214571 I 0.842
tetur04g00890 Tetranychus urticae tetur04g00890 I 0.777
Alligator_sinensis_CCG022145.1 Alligator sinensis Alligator_sinensis_CCG022145.1 I 0.771
ENSGALG00000003599 Gallus gallus ENSGALG00000003599 I 0.769
ENSMGAG00000004357 Meleagris gallopavo ENSMGAG00000004357 I 0.769
Sakowv30001714m.g Saccoglossus kowalevskii Sakowv30001714m.g I 0.765
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I 0.761
CGI_10008753 Crassostrea gigas CGI_10008753 I 0.760
fgenesh2_kg.scaffold_118000001 Branchiostoma floridae fgenesh2_kg.scaffold_118000001 I 0.760
ENSMPUG00000003900 Mustela putorius furo ENSMPUG00000003900 I 0.759
LotgiG104372 Lottia gigantea LotgiG104372 I 0.757
Aan_R010744 Calypte anna Aan_R010744 I 0.757
ENSTGUG00000007382 Taeniopygia guttata ENSTGUG00000007382 I 0.756
ACYPI001903 Acyrthosiphon pisum ACYPI001903 I 0.755
Ogr08509 Ophisaurus gracilis Ogr08509 I 0.755
YQE_10853 Dendroctonus ponderosae YQE_10853 I 0.754
SMAR009230 Strigamia maritima SMAR009230 I 0.753
Pvit_16222 Pogona vitticeps Pvit_16222 I 0.745
ENSACAG00000008549 Anolis carolinensis ENSACAG00000008549 I 0.745
TBX10 Pan troglodytes ENSPTRG00000003972 I 0.739
TBX1 Callithrix jacchus ENSCJAG00000014591 I 0.737
ENSCSAG00000011818 Chlorocebus sabaeus ENSCSAG00000011818 I 0.737
ENSSTOG00000004505 Ictidomys tridecemlineatus ENSSTOG00000004505 I 0.737
DAPPUDRAFT_3881 Daphnia pulex DAPPUDRAFT_3881 I 0.737
ENSPANG00000015763 Papio anubis ENSPANG00000015763 I 0.737
Tbx1 Rattus norvegicus ENSRNOG00000001892 I 0.737
TBX1 Dasypus novemcinctus ENSDNOG00000035422 I 0.737
TBX1 Homo sapiens ENSG00000184058 D 0.737
ENSGGOG00000009181 Gorilla gorilla ENSGGOG00000009181 I 0.737
NV11904 Nasonia vitripennis NV11904 I 0.737
ENSFCAG00000005446 Felis catus ENSFCAG00000005446 I 0.737
Tbx1 Mus musculus ENSMUSG00000009097 D 0.737
ENSP00000331791-D2 Bos grunniens ENSP00000331791-D2 I 0.737
TBX1 Otolemur garnettii ENSOGAG00000003596 I 0.737
TBX1 Loxodonta africana ENSLAFG00000021555 I 0.737
Pvit_15846 Pogona vitticeps Pvit_15846 I 0.735
tbx1.S Xenopus laevis XB-GENE-6254396 I 0.735
tbx1.L Xenopus laevis XB-GENE-478088 I 0.735
tbx1 Xenopus tropicalis XB-GENE-478084 I 0.735
tbx1 Oryzias latipes ENSORLG00000015256 I 0.735
ENSGMOG00000018613 Gadus morhua ENSGMOG00000018613 I 0.735
ENSLACG00000016333 Latimeria chalumnae ENSLACG00000016333 I 0.735
tbx1 Gasterosteus aculeatus ENSGACG00000013057 I 0.735
ENSFALG00000008041 Ficedula albicollis ENSFALG00000008041 I 0.735
ENSAMXG00000020444 Astyanax mexicanus ENSAMXG00000020444 I 0.735
tbx1 Danio rerio ENSDARG00000031891 I 0.735
ENSMEUG00000011624 Macropus eugenii ENSMEUG00000011624 I 0.735
TBX1 Monodelphis domestica ENSMODG00000021176 I 0.735
TBX1 Taeniopygia guttata ENSTGUG00000008395 I 0.735
tbx1 Tetraodon nigroviridis ENSTNIG00000016767 I 0.735
ENSPFOG00000009621 Poecilia formosa ENSPFOG00000009621 I 0.735
ENSPFOG00000009540 Poecilia formosa ENSPFOG00000009540 I 0.735
ENSONIG00000015827 Oreochromis niloticus ENSONIG00000015827 I 0.735
tbx1 Takifugu rubripes ENSTRUG00000014017 I 0.735