NEMVEDRAFT_v1g214570 (Nematostella vectensis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 NEMVEDRAFT_v1g214570 T340839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN

NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.737 0.781
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA

TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.737 0.781
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT

AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.737 0.781
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA

TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.737 0.781
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA

TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.737 0.781
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA

TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.737 0.781
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV

BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.737 0.781
Tbx1
M11386_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.737 0.781
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN

NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.737 0.781
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO35086 T-box 1 186

Links

Other T-box family TFs
Other Nematostella vectensis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000009571 Ailuropoda melanoleuca ENSAMEG00000009571 N 0.000
Alligator_sinensis_CCG018823.1 Alligator sinensis Alligator_sinensis_CCG018823.1 N 0.000
ENSAPLG00000006697 Anas platyrhynchos ENSAPLG00000006697 N 0.000
ZHX3 Anolis carolinensis ENSACAG00000011460 N 0.000
Afo_R009777 Aptenodytes forsteri Afo_R009777 N 0.000
ENSP00000380144-D1 Bos grunniens ENSP00000380144-D1 N 0.000
ZHX3 Bos taurus ENSBTAG00000017594 N 0.000
ZHX3 Callithrix jacchus ENSCJAG00000018012 N 0.000
Aan_R003309 Calypte anna Aan_R003309 N 0.000
ZHX3 Canis familiaris ENSCAFG00000009101 N 0.000
ZHX3 Cavia porcellus ENSCPOG00000002738 N 0.000
Cmyd_10015207 Chelonia mydas Cmyd_10015207 N 0.000
ENSCSAG00000013961 Chlorocebus sabaeus ENSCSAG00000013961 N 0.000
ZHX3 Choloepus hoffmanni ENSCHOG00000009000 N 0.000
ZHX3 Dasypus novemcinctus ENSDNOG00000005387 N 0.000
Zhx3 Dipodomys ordii ENSDORG00000012139 N 0.000
ZHX3 Felis catus ENSFCAG00000009034 N 0.000
ENSFALG00000005566 Ficedula albicollis ENSFALG00000005566 N 0.000
ENSGALG00000027603 Gallus gallus ENSGALG00000027603 N 0.000
ZHX3 Gorilla gorilla ENSGGOG00000008691 N 0.000
ZHX3 Homo sapiens ENSG00000174306 N 0.000
ENSSTOG00000011674 Ictidomys tridecemlineatus ENSSTOG00000011674 N 0.000
ENSLACG00000019016 Latimeria chalumnae ENSLACG00000019016 N 0.000
ENSLOCG00000004596 Lepisosteus oculatus ENSLOCG00000004596 N 0.000
ENSMMUP00000037938 Macaca fascicularis ENSMMUP00000037938 N 0.000
ZHX3 Macaca mulatta ENSMMUG00000005904 N 0.000
ZHX3 Monodelphis domestica ENSMODG00000000636 N 0.000
ENSMPUG00000017699 Mustela putorius furo ENSMPUG00000017699 N 0.000
Zhx3 Mus musculus ENSMUSG00000035877 N 0.000
Myotis_brandtii_ZHX3_10025211 Myotis brandtii Myotis_brandtii_ZHX3_10025211 N 0.000
ZHX3 Myotis lucifugus ENSMLUG00000010226 N 0.000
ENSNLEG00000006488 Nomascus leucogenys ENSNLEG00000006488 N 0.000
ZHX3 Ochotona princeps ENSOPRG00000014931 N 0.000
Ogr10588 Ophisaurus gracilis Ogr10588 N 0.000
ZHX3 Ornithorhynchus anatinus ENSOANG00000014351 N 0.000
ZHX3 Oryctolagus cuniculus ENSOCUG00000006439 N 0.000
ZHX3 Otolemur garnettii ENSOGAG00000013363 N 0.000
ZHX3 Pan troglodytes ENSPTRG00000013501 N 0.000
ENSPANG00000023855 Papio anubis ENSPANG00000023855 N 0.000
ENSPSIG00000010741 Pelodiscus sinensis ENSPSIG00000010741 N 0.000
Pvit_08734 Pogona vitticeps Pvit_08734 N 0.000
ENSPPYG00000011012 Pongo abelii ENSPPYG00000011012 N 0.000
Zhx3 Rattus norvegicus ENSRNOG00000027988 N 0.000
ZHX3 Sorex araneus ENSSARG00000005424 N 0.000
ZHX3 Taeniopygia guttata ENSTGUG00000004817 N 0.000
ZHX3 Tursiops truncatus ENSTTRG00000002687 N 0.000