SMAR005933 (Strigamia maritima)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 SMAR005933 T340886_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX19
M03562_2.00
Homo sapiens
NDTVRCACVTANGTGYKANN

NNTMRCACNTABGTGYBAHN
SELEX
Jolma et al.(2013)
TBX19_1
0.747 0.559
TBX19
M05803_2.00
Homo sapiens
NAGGTGYBAHWDTMRCACNTN

NANGTGYKAHWDTVRCACCTN
SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX
0.747 0.559
TBX19
M05804_2.00
Homo sapiens
NANGTGYKAHWDTVRCACSTN

NASGTGYBAHWDTMRCACNTN
SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX
0.747 0.559
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR005933-PA T-box 37 217

Links

Other T-box family TFs
Other Strigamia maritima TFs

Invalid Input OrderBy

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action