CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TC015327
(
Tribolium castaneum
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
TC015327
T340915_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx1
M00832_2.00
Mus musculus
NRGTGTGAANN
NNTTCACACYN
PBM
Weirauch et al.(2013)
pTH3822
0.833
0.829
TBX1
M03570_2.00
Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT
SELEX
Jolma et al.(2013)
TBX1_1
0.833
0.829
TBX1
M03571_2.00
Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT
SELEX
Jolma et al.(2013)
TBX1_2
0.833
0.829
TBX1
M03572_2.00
Homo sapiens
AGGTGTGA
TCACACCT
SELEX
Jolma et al.(2013)
TBX1_3
0.833
0.829
TBX1
M03573_2.00
Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR
SELEX
Jolma et al.(2013)
TBX1_4
0.833
0.829
TBX1
M03574_2.00
Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR
SELEX
Jolma et al.(2013)
TBX1_5
0.833
0.829
TBX1
M05821_2.00
Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV
SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX
0.833
0.829
Tbx1
M11386_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX1_07
0.833
0.829
TBX1
M05822_2.00
Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH
SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX
0.833
0.829
org-1
M03988_2.00
Drosophila melanogaster
DRGTGTBAD
HTVACACYH
SELEX
Nitta et al.(2015)
org-1_1
0.776
0.779
org-1
M03989_2.00
Drosophila melanogaster
TRACACYTARGTGTGA
TCACACYTARGTGTYA
SELEX
Nitta et al.(2015)
org-1_2
0.776
0.779
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TC015327-PA
T-box
86
273
ILEMKHLWDEFHSLGTEMIVTKAGRRMFPTFQVKLCGLDLHAEYMLMMDFVPVDDKRYRYAFHSSSWVVAGKADPVSPPRIHVHPDSPATGAQWMKQTVSFDKLKLTNNQLDDNGHIILNSMHRYQPRFHIVYLPSKNTTTATEENCSENFKTFVFPETAFTAVTAYQNHRITQLKIASNPFAKGFRD
Links
Other
T-box
family TFs
Other
Tribolium castaneum
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LDEC008541
Leptinotarsa decemlineata
LDEC008541
I
0.907
YQE_10853
Dendroctonus ponderosae
YQE_10853
I
0.886
ACYPI001903
Acyrthosiphon pisum
ACYPI001903
I
0.870
DAPPUDRAFT_3881
Daphnia pulex
DAPPUDRAFT_3881
I
0.857
L798_01101
Zootermopsis nevadensis
L798_01101
I
0.855
fgenesh2_kg.scaffold_118000001
Branchiostoma floridae
fgenesh2_kg.scaffold_118000001
I
0.850
PHUM607490
Pediculus humanus
PHUM607490
I
0.847
Cflo_09868--XP_624689.2_APIME
Camponotus floridanus
Cflo_09868--XP_624689.2_APIME
I
0.845
Hsal_04471--XP_624689.2_APIME
Harpegnathos saltator
Hsal_04471--XP_624689.2_APIME
I
0.836
SMAR009230
Strigamia maritima
SMAR009230
I
0.835
GB55445
Apis mellifera
GB55445
I
0.835
TBX1
Dasypus novemcinctus
ENSDNOG00000035422
I
0.833
TBX1
Homo sapiens
ENSG00000184058
D
0.833
ENSGGOG00000009181
Gorilla gorilla
ENSGGOG00000009181
I
0.833
ENSP00000331791-D2
Bos grunniens
ENSP00000331791-D2
I
0.833
ENSSTOG00000004505
Ictidomys tridecemlineatus
ENSSTOG00000004505
I
0.833
ENSFCAG00000005446
Felis catus
ENSFCAG00000005446
I
0.833
ENSCSAG00000011818
Chlorocebus sabaeus
ENSCSAG00000011818
I
0.833
Tbx1
Rattus norvegicus
ENSRNOG00000001892
I
0.833
ENSPANG00000015763
Papio anubis
ENSPANG00000015763
I
0.833
Tbx1
Mus musculus
ENSMUSG00000009097
D
0.833
TBX1
Callithrix jacchus
ENSCJAG00000014591
I
0.833
TBX1
Loxodonta africana
ENSLAFG00000021555
I
0.833
TBX1
Taeniopygia guttata
ENSTGUG00000008395
I
0.831
ENSMEUG00000011624
Macropus eugenii
ENSMEUG00000011624
I
0.831
tbx1.L
Xenopus laevis
XB-GENE-478088
I
0.831
ENSPFOG00000009540
Poecilia formosa
ENSPFOG00000009540
I
0.831
TBX1
Monodelphis domestica
ENSMODG00000021176
I
0.831
ENSPFOG00000009621
Poecilia formosa
ENSPFOG00000009621
I
0.831
ENSONIG00000015827
Oreochromis niloticus
ENSONIG00000015827
I
0.831
tbx1
Oryzias latipes
ENSORLG00000015256
I
0.831
tbx1
Gasterosteus aculeatus
ENSGACG00000013057
I
0.831
ENSLACG00000016333
Latimeria chalumnae
ENSLACG00000016333
I
0.831
Pvit_15846
Pogona vitticeps
Pvit_15846
I
0.831
ENSAMXG00000020444
Astyanax mexicanus
ENSAMXG00000020444
I
0.831
tbx1.S
Xenopus laevis
XB-GENE-6254396
I
0.831
tbx1
Xenopus tropicalis
XB-GENE-478084
I
0.831
tbx1
Danio rerio
ENSDARG00000031891
I
0.831
NV11904
Nasonia vitripennis
NV11904
I
0.831
tbx1
Takifugu rubripes
ENSTRUG00000014017
I
0.831
ENSGMOG00000018613
Gadus morhua
ENSGMOG00000018613
I
0.831
ENSFALG00000008041
Ficedula albicollis
ENSFALG00000008041
I
0.831
tbx1
Tetraodon nigroviridis
ENSTNIG00000016767
I
0.831
TBX1
Otolemur garnettii
ENSOGAG00000003596
I
0.830
CapteG226618
Capitella teleta
CapteG226618
I
0.828
MDOA001403
Musca domestica
MDOA001403
I
0.826
CGI_10008753
Crassostrea gigas
CGI_10008753
I
0.819
LLOJ005386
Lutzomyia longipalpis
LLOJ005386
I
0.817
TBX10
Procavia capensis
ENSPCAG00000009585
I
0.817
Sakowv30001714m.g
Saccoglossus kowalevskii
Sakowv30001714m.g
I
0.816
TBX10
Monodelphis domestica
ENSMODG00000021334
I
0.815
ENSMPUG00000003900
Mustela putorius furo
ENSMPUG00000003900
I
0.811
LotgiG104372
Lottia gigantea
LotgiG104372
I
0.808
TBX10
Homo sapiens
ENSG00000167800
I
0.805
ENSBTAP00000015683-D1
Bos grunniens
ENSBTAP00000015683-D1
I
0.805
ENSPANG00000006501
Papio anubis
ENSPANG00000006501
I
0.805
TBX10
Felis catus
ENSFCAG00000001760
I
0.805
TBX10
Gorilla gorilla
ENSGGOG00000011961
I
0.805
Tbx10
Dipodomys ordii
ENSDORG00000010070
I
0.805
ENSAMEG00000001098
Ailuropoda melanoleuca
ENSAMEG00000001098
I
0.805
TBX10
Canis familiaris
ENSCAFG00000011264
I
0.805
ENSCSAG00000008726
Chlorocebus sabaeus
ENSCSAG00000008726
I
0.805
Myotis_brandtii_Tbx10_10030825
Myotis brandtii
Myotis_brandtii_Tbx10_10030825
I
0.805
ENSP00000335191
Macaca fascicularis
ENSP00000335191
I
0.805
Tbx10
Mus musculus
ENSMUSG00000037477
I
0.805
Tbx10
Rattus norvegicus
ENSRNOG00000017944
I
0.805
ENSMEUG00000007568
Macropus eugenii
ENSMEUG00000007568
I
0.805
ENSMMUG00000018529
Macaca mulatta
ENSMMUG00000018529
I
0.805
ENSSTOG00000011629
Ictidomys tridecemlineatus
ENSSTOG00000011629
I
0.805
TBX10
Pan troglodytes
ENSPTRG00000003972
I
0.805
TBX10
Pteropus vampyrus
ENSPVAG00000008592
I
0.805
ENSMPUG00000004076
Mustela putorius furo
ENSMPUG00000004076
I
0.805
TBX10
Otolemur garnettii
ENSOGAG00000000784
I
0.802
KGM_08622
Danaus plexippus
KGM_08622
I
0.800
HMEL015536
Heliconius melpomene
HMEL015536
I
0.800
AATE015045
Anopheles atroparvus
AATE015045
I
0.795
AALB002686
Anopheles albimanus
AALB002686
I
0.795
Myotis_brandtii_Tbx1_10021844
Myotis brandtii
Myotis_brandtii_Tbx1_10021844
I
0.795
AARA001806
Anopheles arabiensis
AARA001806
I
0.795
ASIS010497
Anopheles sinensis
ASIS010497
I
0.795
AMEC007874
Anopheles melas
AMEC007874
I
0.795
AMAM012836
Anopheles maculatus
AMAM012836
I
0.795
AMEM018425
Anopheles merus
AMEM018425
I
0.795
AMIN000536
Anopheles minimus
AMIN000536
I
0.795
ACUA026816
Anopheles culicifacies
ACUA026816
I
0.795
AFUN001113
Anopheles funestus
AFUN001113
I
0.795
AQUA006531
Anopheles quadriannulatus
AQUA006531
I
0.795
ADIR010556
Anopheles dirus
ADIR010556
I
0.795
AEPI001144
Anopheles epiroticus
AEPI001144
I
0.795
AFAF008331
Anopheles farauti
AFAF008331
I
0.795
tetur04g00890
Tetranychus urticae
tetur04g00890
I
0.794
CPIJ007784
Culex quinquefasciatus
CPIJ007784
I
0.793
CpipJ_CPIJ007784
Culex pipiens
CpipJ_CPIJ007784
I
0.793
AAEL018165
Aedes aegypti
AAEL018165
I
0.793
Aan_R010744
Calypte anna
Aan_R010744
I
0.792
ENSGALG00000003599
Gallus gallus
ENSGALG00000003599
I
0.792
ENSMGAG00000004357
Meleagris gallopavo
ENSMGAG00000004357
I
0.792
ENSTGUG00000007382
Taeniopygia guttata
ENSTGUG00000007382
I
0.791
ENSCSAVG00000000786
Ciona savignyi
ENSCSAVG00000000786
I
0.790
BGIBMGA013132
Bombyx mori
BGIBMGA013132
I
0.790
ENSACAG00000008549
Anolis carolinensis
ENSACAG00000008549
I
0.780
ENSLACG00000004994
Latimeria chalumnae
ENSLACG00000004994
I
0.780
Ogr08509
Ophisaurus gracilis
Ogr08509
I
0.780
Pvit_16222
Pogona vitticeps
Pvit_16222
I
0.780
NEMVEDRAFT_v1g214571
Nematostella vectensis
NEMVEDRAFT_v1g214571
I
0.777
TBX10
Bos taurus
ENSBTAG00000011816
I
0.777
org-1
Drosophila melanogaster
FBgn0021767
D
0.776
GI15769
Drosophila mojavensis
FBgn0138518
I
0.776
GL20248
Drosophila persimilis
FBgn0157843
I
0.776
GH12234
Drosophila grimshawi
FBgn0119713
I
0.776
GF22584
Drosophila ananassae
FBgn0099578
I
0.776
GA10837
Drosophila pseudoobscura
FBgn0070893
I
0.776
GM21356
Drosophila sechellia
FBgn0176237
I
0.776
GG19051
Drosophila erecta
FBgn0111257
I
0.776
GJ18625
Drosophila virilis
FBgn0205781
I
0.776
GE17455
Drosophila yakuba
FBgn0234921
I
0.776
GK19893
Drosophila willistoni
FBgn0221891
I
0.776
CLEC006885
Cimex lectularius
CLEC006885
I
0.772
ENSOARG00000013751
Ovis aries
ENSOARG00000013751
I
0.769
TBX1
Procavia capensis
ENSPCAG00000010176
I
0.769
Alligator_sinensis_CCG022145.1
Alligator sinensis
Alligator_sinensis_CCG022145.1
I
0.761
L596_g22450
Steinernema carpocapsae
L596_g22450
N
0.758
L892_g7838
Steinernema scapterisci
L892_g7838
N
0.758
nDi.2.2.2.g09215
Dirofilaria immitis
nDi.2.2.2.g09215
N
0.758
WBGene00244664
Onchocerca volvulus
WBGene00244664
N
0.750
TCLT_0000448101
Thelazia callipaeda
TCLT_0000448101
N
0.750
Gfo_R011877
Geospiza fortis
Gfo_R011877
I
0.749
ASU_06082
Ascaris suum
ASU_06082
N
0.748
ALUE_0000283301
Ascaris lumbricoides
ALUE_0000283301
N
0.743
DME_0000045201
Dracunculus medinensis
DME_0000045201
N
0.741
ENSPFOG00000007309
Poecilia formosa
ENSPFOG00000007309
I
0.739