CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TriadG30221
(
Trichoplax adhaerens
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
TriadG30221
T340927_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.735
0.610
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.735
0.610
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.735
0.610
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA
TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.735
0.610
TBX5
M11374_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.735
0.610
TBX5
M11375_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.735
0.610
Tbx5
M11387_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.735
0.610
TBX5
M11376_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.735
0.610
TBX5
M11377_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.735
0.610
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TriadP30221
T-box
49
231
LSLESRDLWQKFNECKTEMIITKQGRRMFPTIKVSVSGMDTKAKYLVLMDVIAVDENRYKYQHNQWTVAGKAEPAIPNRYYFHPDSPSTGTQWMRQVISFQKLKITNNQMDPFGHIILNSMHKYQPRIHIIQVCGQDKFSPCVSKASVFVFSETQFIAVTAYQNSQITDLKIQYNPFAKGFRC
Links
Other
T-box
family TFs
Other
Trichoplax adhaerens
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22029974m.g
Octopus bimaculoides
Ocbimv22029974m.g
I
0.778
CGI_10005914
Crassostrea gigas
CGI_10005914
I
0.774
Aqu1.217884
Amphimedon queenslandica
Aqu1.217884
N
0.761
tbx5b
Danio rerio
ENSDARG00000092060
I
0.748
CapteG110717
Capitella teleta
CapteG110717
I
0.745
tbx5
Xenopus tropicalis
XB-GENE-486855
I
0.743
tbx5.L
Xenopus laevis
XB-GENE-865653
I
0.743
ENSLOCG00000007616
Lepisosteus oculatus
ENSLOCG00000007616
I
0.743
tbx5b
Gasterosteus aculeatus
ENSGACG00000009550
I
0.743
TBX6
Meleagris gallopavo
ENSMGAG00000007663
I
0.742
ENSAMXG00000007100
Astyanax mexicanus
ENSAMXG00000007100
I
0.742
ENSAPLG00000006398
Anas platyrhynchos
ENSAPLG00000006398
I
0.742
TBX6
Gallus gallus
ENSGALG00000006374
I
0.742
tbx5a
Takifugu rubripes
ENSTRUG00000015054
I
0.738
ENSGMOG00000011740
Gadus morhua
ENSGMOG00000011740
I
0.738
tbx5a
Tetraodon nigroviridis
ENSTNIG00000009036
I
0.738
tbx5a
Oryzias latipes
ENSORLG00000007339
I
0.738
ENSPFOG00000019824
Poecilia formosa
ENSPFOG00000019824
I
0.738
tbx5a
Gasterosteus aculeatus
ENSGACG00000016787
I
0.738
ENSXMAG00000005348
Xiphophorus maculatus
ENSXMAG00000005348
I
0.738
tbx5a
Danio rerio
ENSDARG00000024894
I
0.738
ENSAMXG00000009196
Astyanax mexicanus
ENSAMXG00000009196
I
0.738
D915_09218
Fasciola hepatica
D915_09218
I
0.737
ENSPPYG00000004994
Pongo abelii
ENSPPYG00000004994
I
0.735
TBX5
Pan troglodytes
ENSPTRG00000005496
I
0.735
Tbx5
Rattus norvegicus
ENSRNOG00000001399
I
0.735
Cmyd_10018097
Chelonia mydas
Cmyd_10018097
I
0.735
ENSPFOG00000016001
Poecilia formosa
ENSPFOG00000016001
I
0.735
L596_g26549
Steinernema carpocapsae
L596_g26549
I
0.735
ENSPANG00000016891
Papio anubis
ENSPANG00000016891
I
0.735
L892_g3119
Steinernema scapterisci
L892_g3119
I
0.735
TBX5
Sus scrofa
ENSSSCG00000009867
I
0.735
TBX5
Tursiops truncatus
ENSTTRG00000000980
I
0.735
ENSBTAP00000015125-D1
Bos grunniens
ENSBTAP00000015125-D1
I
0.735
ENSP00000384152
Macaca fascicularis
ENSP00000384152
I
0.735
Myotis_brandtii_TBX5_10028219
Myotis brandtii
Myotis_brandtii_TBX5_10028219
I
0.735
tbx5
Oryzias latipes
ENSORLG00000008185
I
0.735
Ogr05323
Ophisaurus gracilis
Ogr05323
I
0.735
Alligator_sinensis_CCG008096.1
Alligator sinensis
Alligator_sinensis_CCG008096.1
I
0.735
TBX5
Macaca mulatta
ENSMMUG00000016202
I
0.735
TBX5
Dasypus novemcinctus
ENSDNOG00000025303
I
0.735
TBX5
Equus caballus
ENSECAG00000017114
I
0.735
ENSFALG00000007778
Ficedula albicollis
ENSFALG00000007778
I
0.735
TBX5
Felis catus
ENSFCAG00000005574
I
0.735
ENSCSAG00000002347
Chlorocebus sabaeus
ENSCSAG00000002347
I
0.735
TBX5
Cavia porcellus
ENSCPOG00000014558
I
0.735
ENSAMEG00000001112
Ailuropoda melanoleuca
ENSAMEG00000001112
I
0.735
TBX5
Bos taurus
ENSBTAG00000011384
I
0.735
TBX5
Canis familiaris
ENSCAFG00000009189
I
0.735
TBX5
Callithrix jacchus
ENSCJAG00000009744
I
0.735
TBX5
Homo sapiens
ENSG00000089225
D
0.735
TBX5
Gallus gallus
ENSGALG00000008253
I
0.735
Tbx5
Mus musculus
ENSMUSG00000018263
D
0.735
ENSOARG00000006614
Ovis aries
ENSOARG00000006614
I
0.735
TBX5
Oryctolagus cuniculus
ENSOCUG00000012715
I
0.735
TBX5
Otolemur garnettii
ENSOGAG00000016204
I
0.735
ENSMPUG00000002715
Mustela putorius furo
ENSMPUG00000002715
I
0.735
TBX5
Myotis lucifugus
ENSMLUG00000016530
I
0.735
TBX5
Gorilla gorilla
ENSGGOG00000013775
I
0.735
ENSLACG00000002339
Latimeria chalumnae
ENSLACG00000002339
I
0.735
TBX5
Loxodonta africana
ENSLAFG00000010125
I
0.735
TBX5
Meleagris gallopavo
ENSMGAG00000010075
I
0.735
ENSONIG00000013614
Oreochromis niloticus
ENSONIG00000013614
I
0.735