tbx-40 (Caenorhabditis elegans)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 WBGene00006559 T340948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tbx-40
M02497_2.00		 Caenorhabditis elegans
NNCTTGGYASN
NSTRCCAAGNN		 PBM
Weirauch et al.(2014)
pTH8411		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tbx-39
M00715_2.00 		Caenorhabditis elegans
NAACTTRGYNNN
NNNRCYAAGTTN		 PBM
Narasimhan et al.(2015)
pTH9884 		0.794 0.926
For this family, TFs with SR scores > 0.734 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02497_2.00 T-box 9 188

DNA Binding Domains

Protein ID Domain From To Sequence
Y73F8A.17 T-box 9 188

Links

Other T-box family TFs
Other Caenorhabditis elegans TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tbx-39 Caenorhabditis elegans WBGene00006558 D 0.794