CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001030.1
(
Alligator sinensis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Alligator_sinensis_CCG001030.1
T340994_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001030.1
T-box
77
260
VTLDNNSMWNEFYHRNTEMILTKQGRRMFPYCRYWITGLDSNQKYILVMDISPVDNHRYKWNGRWWEPSGKAEPHVLGRVFIHPESPSTGQYWMHQPVSFYKLKLTNNTLDQEGHIILHSMHRYLPRLHLVPADKATEVIQLNGPDVHTFTFPQTEFFAVTAYQNIQITQLKIDYNPFAKGFRD
Links
Other
T-box
family TFs
Other
Alligator sinensis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000000330
Pelodiscus sinensis
ENSPSIG00000000330
N
0.920
ENSPSIG00000004501
Pelodiscus sinensis
ENSPSIG00000004501
N
0.920
MGA
Sus scrofa
ENSSSCG00000004739
N
0.919
MGA
Homo sapiens
ENSG00000174197
D
0.915
ENSMMUG00000010294
Macaca mulatta
ENSMMUG00000010294
N
0.915
MGA
Gorilla gorilla
ENSGGOG00000001640
I
0.915
Tal_R011609
Tyto alba
Tal_R011609
N
0.907
MGA
Ochotona princeps
ENSOPRG00000003327
N
0.907
Mga
Dipodomys ordii
ENSDORG00000013098
N
0.895
Ogr06445
Ophisaurus gracilis
Ogr06445
N
0.885
ENSACAG00000014307
Anolis carolinensis
ENSACAG00000014307
N
0.868
ENSAMXG00000000314
Astyanax mexicanus
ENSAMXG00000000314
N
0.796