ENSP00000356795-D1 (Bos grunniens)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 ENSP00000356795-D1 T341063_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TBX19
M03562_2.00
Homo sapiens
NDTVRCACVTANGTGYKANN

NNTMRCACNTABGTGYBAHN
SELEX
Jolma et al.(2013)
TBX19_1
0.903 0.966
TBX19
M05803_2.00
Homo sapiens
NAGGTGYBAHWDTMRCACNTN

NANGTGYKAHWDTVRCACCTN
SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX
0.903 0.966
TBX19
M05804_2.00
Homo sapiens
NANGTGYKAHWDTVRCACSTN

NASGTGYBAHWDTMRCACNTN
SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX
0.903 0.966
T
M05809_2.00
Homo sapiens
NANGTGYGAHWWNTVRCACCTN

NAGGTGYBANWWDTCRCACNTN
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1
0.860 0.807
T
M05810_2.00
Homo sapiens
DTCRCAYVTABGTGYGAH

DTCRCACVTABRTGYGAH
SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2
0.860 0.807
T
M09427_2.00
Homo sapiens
BYNVCANNNVDGTGWKARDN

NHYTMWCACHBNNNTGBNRV
Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A
0.860 0.807
T
M09431_2.00
Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN

NTKNVCABHDRNSTGTSAAWTYNBB
Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B
0.860 0.807
T
M09651_2.00
Mus musculus
NYTVDCASNNNNSTGHBARNN

NNYTVDCASNNNNSTGHBARN
Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963
0.860 0.807
T
M11384_2.00
Homo sapiens
MKHBTSACACSTAGGTGTGAAATK

MATTTCACACCTASGTGTSAVDMK
Transfac
Matys et al.(2006)
V$BRACH_01
0.860 0.807
T
M05811_2.00
Homo sapiens
NABGTGYGAHWWNTVRCACSTN

NASGTGYBANWWDTCRCACVTN
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1
0.860 0.807
T
M05812_2.00
Homo sapiens
DTMRCAYVTABGTGYKAH

DTMRCACVTABRTGYKAH
SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2
0.860 0.807
byn
M03984_2.00
Drosophila melanogaster
ABGTGYGADDD

HHHTCRCACVT
SELEX
Nitta et al.(2015)
byn_1
0.809 0.739
byn
M03985_2.00
Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH

DNGTGYBAHWWDTVRCACNH
SELEX
Nitta et al.(2015)
byn_2
0.809 0.739
byn
M03986_2.00
Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD

HHTCRCACHYHNNNNNNHNHNHTCRCACHY
SELEX
Nitta et al.(2015)
byn_3
0.809 0.739
byn
M03987_2.00
Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN

NDTMRCAYNWWNRTGYKANN
SELEX
Nitta et al.(2015)
byn_4
0.809 0.739
byn
M06453_2.00
Drosophila melanogaster
ADGTGCDA

THGCACHT
B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723
0.809 0.739
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000356795-D1 T-box 43 218

Links

Other T-box family TFs
Other Bos grunniens TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000009576 Ailuropoda melanoleuca ENSAMEG00000009576 I 0.000
ENSCPOG00000011396 Cavia porcellus ENSCPOG00000011396 I 0.000
ENSCSAG00000000923 Chlorocebus sabaeus ENSCSAG00000000923 I 0.000
ENSMEUG00000013368 Macropus eugenii ENSMEUG00000013368 I 0.000
ENSMPUG00000015896 Mustela putorius furo ENSMPUG00000015896 I 0.000
ENSNLEG00000008477 Nomascus leucogenys ENSNLEG00000008477 I 0.000
ENSOARG00000007586 Ovis aries ENSOARG00000007586 I 0.000
ENSP00000324064-D75 Bos grunniens ENSP00000324064-D75 I 0.000
ENSPANG00000018160 Papio anubis ENSPANG00000018160 I 0.000
ENSPPYG00000001743 Pongo abelii ENSPPYG00000001743 I 0.000
ENSSSCG00000023614 Sus scrofa ENSSSCG00000023614 I 0.000
ENSSTOG00000001212 Ictidomys tridecemlineatus ENSSTOG00000001212 I 0.000
Myotis_brandtii_ZNF436_10029737 Myotis brandtii Myotis_brandtii_ZNF436_10029737 I 0.000
Zfp46 Mus musculus ENSMUSG00000051351 I 0.000
Zfp46 Rattus norvegicus ENSRNOG00000049975 I 0.000
Zfp46 Dipodomys ordii ENSDORG00000007438 I 0.000
ZNF436 Myotis lucifugus ENSMLUG00000007596 I 0.000
ZNF436 Pan troglodytes ENSPTRG00000000325 I 0.000
ZNF436 Pteropus vampyrus ENSPVAG00000014803 I 0.000
ZNF436 Gorilla gorilla ENSGGOG00000011273 I 0.000
ZNF436 Sorex araneus ENSSARG00000012155 I 0.000
ZNF436 Choloepus hoffmanni ENSCHOG00000005098 I 0.000
ZNF436 Canis familiaris ENSCAFG00000031798 I 0.000
ZNF436 Tupaia belangeri ENSTBEG00000002827 I 0.000
ZNF436 Tursiops truncatus ENSTTRG00000007756 I 0.000
ZNF436 Vicugna pacos ENSVPAG00000006412 I 0.000
ZNF436 Bos taurus ENSBTAG00000002594 I 0.000
ZNF436 Dasypus novemcinctus ENSDNOG00000015883 I 0.000
ZNF436 Procavia capensis ENSPCAG00000010535 I 0.000
ZNF436 Macaca mulatta ENSMMUG00000010973 I 0.000
ZNF436 Monodelphis domestica ENSMODG00000016145 I 0.000
ZNF436 Homo sapiens ENSG00000125945 D 0.000
ZNF436 Felis catus ENSFCAG00000030008 I 0.000
ZNF436 Erinaceus europaeus ENSEEUG00000005276 I 0.000
ZNF436 Equus caballus ENSECAG00000011988 I 0.000
ZNF436 Oryctolagus cuniculus ENSOCUG00000010670 I 0.000
ZNF436 Otolemur garnettii ENSOGAG00000009181 I 0.000
ZNF436 Ochotona princeps ENSOPRG00000012417 I 0.000
ZNF436 Microcebus murinus ENSMICG00000005876 I 0.000
ZNF436 Loxodonta africana ENSLAFG00000012795 I 0.000