CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R010839
(
Geospiza fortis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Gfo_R010839
T341090_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R010839
T-box
56
168
VFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRPDVHPDSPRQLVSFQKLKLTNNHLDPFGHVSAGA
Gfo_R010839
T-box
209
233
LKTPQKYEITQLKIENNPFAKGFRG
Links
Other
T-box
family TFs
Other
Geospiza fortis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TBX5
Taeniopygia guttata
ENSTGUG00000009001
N
0.851
Pvit_13523
Pogona vitticeps
Pvit_13523
N
0.848
TBR1
Microcebus murinus
ENSMICG00000009721
N
0.771
Afo_R013583
Aptenodytes forsteri
Afo_R013583
N
0.769