CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_TBX6_10014444
(
Myotis brandtii
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
Myotis_brandtii_TBX6_10014444
T341120_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX6
M05805_2.00
Homo sapiens
NRSGTGTBAN
NTVACACSYN
SELEX
Yin et al.(2017)
TBX6_eDBD_HT-SELEX
0.876
0.961
TBX6
M05806_2.00
Homo sapiens
NTVRCACBHN
NDVGTGYBAN
SELEX
Yin et al.(2017)
TBX6_eDBD_Methyl-HT-SELEX
0.876
0.961
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_TBX6_10014444
T-box
93
273
LSLENQELWKEFNSVGTEMIITKAGRRMFPACRVSVTGLDPEARYLFLLDVVPVDGARYRWQGRRWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRVHLVRAAQLCSQHWGGVASFRFPETMFISVTAYQNPRITQLKIAANPFAKGFRE
Links
Other
T-box
family TFs
Other
Myotis brandtii
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000004040
Ovis aries
ENSOARG00000004040
I
0.920
TBX6
Myotis lucifugus
ENSMLUG00000011244
I
0.920
ENSEEUG00000012843
Erinaceus europaeus
ENSEEUG00000012843
I
0.917
TBX6
Loxodonta africana
ENSLAFG00000017884
I
0.917
TBX6
Equus caballus
ENSECAG00000022374
I
0.917
ENSMPUG00000012586
Mustela putorius furo
ENSMPUG00000012586
I
0.917
TBX6
Bos taurus
ENSBTAG00000009046
I
0.917
ENSBTAP00000011919-D1
Bos grunniens
ENSBTAP00000011919-D1
I
0.917
TBX6
Procavia capensis
ENSPCAG00000000071
I
0.915
TBX6
Monodelphis domestica
ENSMODG00000015682
I
0.908
TBX6
Oryctolagus cuniculus
ENSOCUG00000026026
I
0.907
TBX6
Felis catus
ENSFCAG00000014172
I
0.907
ENSSTOG00000000869
Ictidomys tridecemlineatus
ENSSTOG00000000869
I
0.907
TBX6
Cavia porcellus
ENSCPOG00000021165
I
0.907
TBX6
Pan troglodytes
ENSPTRG00000007985
I
0.904
TBX6
Otolemur garnettii
ENSOGAG00000011659
I
0.904
ENSPPYG00000007242
Pongo abelii
ENSPPYG00000007242
I
0.904
ENSPANG00000000556
Papio anubis
ENSPANG00000000556
I
0.904
ENSNLEG00000002044
Nomascus leucogenys
ENSNLEG00000002044
I
0.904
TBX6
Gorilla gorilla
ENSGGOG00000012924
I
0.904
ENSCSAG00000006175
Chlorocebus sabaeus
ENSCSAG00000006175
I
0.904
TBX6
Microcebus murinus
ENSMICG00000009134
I
0.904
TBX6
Callithrix jacchus
ENSCJAG00000035904
I
0.904
TBX6
Macaca mulatta
ENSMMUG00000000981
I
0.904
TBX6
Echinops telfairi
ENSETEG00000019233
I
0.903
Tbx6
Mus musculus
ENSMUSG00000030699
I
0.902
Tbx6
Rattus norvegicus
ENSRNOG00000019771
I
0.902
TBX6
Pteropus vampyrus
ENSPVAG00000010556
I
0.887
TBX6
Ochotona princeps
ENSOPRG00000009784
I
0.880
TBX6
Homo sapiens
ENSG00000149922
D
0.876
TBX6
Tursiops truncatus
ENSTTRG00000005534
I
0.861
csin100383
Clonorchis sinensis
csin100383
I
0.750
T265_12717
Opisthorchis viverrini
T265_12717
I
0.750
Sjc_0040480
Schistosoma japonicum
Sjc_0040480
I
0.745
D915_09218
Fasciola hepatica
D915_09218
I
0.744
Smp_003900
Schistosoma mansoni
Smp_003900
I
0.740
CapteG163410
Capitella teleta
CapteG163410
I
0.736