Ogr02099 (Ophisaurus gracilis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Ogr02099 T341123_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.920 0.978
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.920 0.978
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.920 0.978
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.920 0.978
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.920 0.978
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.906 0.950
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.906 0.950
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.906 0.950
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.906 0.950
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.906 0.950
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.906 0.950
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.906 0.950
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.906 0.950
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.875 0.945
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.875 0.939
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.840 0.867
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.819 0.713
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.797 0.657
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.797 0.657
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.797 0.657
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.797 0.657
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.797 0.657
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.797 0.657
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.797 0.657
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.797 0.657
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.797 0.657
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.794 0.718
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.783 0.657
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.783 0.657
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT

AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.783 0.657
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr02099 T-box 94 274

Links

Other T-box family TFs
Other Ophisaurus gracilis TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL004174 Aedes aegypti AAEL004174 I 0.000
AAEL013504 Aedes aegypti AAEL013504 I 0.000
AALB004781 Anopheles albimanus AALB004781 I 0.000
AARA007626 Anopheles arabiensis AARA007626 I 0.000
AATE019626 Anopheles atroparvus AATE019626 I 0.000
ACHR005948 Anopheles christyi ACHR005948 I 0.000
ACOM024997 Anopheles coluzzii ACOM024997 I 0.000
ACUA013605 Anopheles culicifacies ACUA013605 I 0.000
ADAC005019 Anopheles darlingi ADAC005019 I 0.000
ADIR008855 Anopheles dirus ADIR008855 I 0.000
AEPI008783 Anopheles epiroticus AEPI008783 I 0.000
AFAF003219 Anopheles farauti AFAF003219 I 0.000
AFUN010103 Anopheles funestus AFUN010103 I 0.000
AGAP005895 Anopheles gambiae AGAP005895 I 0.000
AGAP005896 Anopheles gambiae AGAP005896 I 0.000
AMEC016175 Anopheles melas AMEC016175 I 0.000
AMEM015129 Anopheles merus AMEM015129 I 0.000
AMIN011562 Anopheles minimus AMIN011562 I 0.000
AQUA010990 Anopheles quadriannulatus AQUA010990 I 0.000
ASIS012852 Anopheles sinensis ASIS012852 I 0.000
ASTEI02809 Anopheles stephensi ASTEI02809 I 0.000
CPIJ004922 Culex quinquefasciatus CPIJ004922 I 0.000
CpipJ_CPIJ004922 Culex pipiens CpipJ_CPIJ004922 I 0.000
Doc1 Drosophila melanogaster FBgn0028789 I 0.000
Doc2 Drosophila melanogaster FBgn0035956 D 0.000
Doc3 Drosophila melanogaster FBgn0035954 D 0.000
ECANG7_07504 Echinococcus canadensis ECANG7_07504 I 0.000
ENSGMOG00000012645 Gadus morhua ENSGMOG00000012645 I 0.839
ENSONIG00000011959 Oreochromis niloticus ENSONIG00000011959 I 0.852
GA18655 Drosophila pseudoobscura FBgn0078655 I 0.000
GA18682 Drosophila pseudoobscura FBgn0078682 I 0.000
GA18721 Drosophila pseudoobscura FBgn0078721 I 0.000
GD14148 Drosophila simulans FBgn0185836 I 0.000
GD14149 Drosophila simulans FBgn0185837 I 0.000
GE20799 Drosophila yakuba FBgn0238093 I 0.000
GE20800 Drosophila yakuba FBgn0238094 I 0.000
GE21264 Drosophila yakuba FBgn0238533 I 0.000
GF10130 Drosophila ananassae FBgn0087171 I 0.000
GF24374 Drosophila ananassae FBgn0101368 I 0.000
GF24375 Drosophila ananassae FBgn0101369 I 0.000
GG14368 Drosophila erecta FBgn0106627 I 0.000
GG14369 Drosophila erecta FBgn0106628 I 0.000
GG15041 Drosophila erecta FBgn0107295 I 0.000
GH14955 Drosophila grimshawi FBgn0122430 I 0.000
GH16540 Drosophila grimshawi FBgn0124011 I 0.741
GH16541 Drosophila grimshawi FBgn0124012 I 0.000
GI11482 Drosophila mojavensis FBgn0134242 I 0.000
GI13829 Drosophila mojavensis FBgn0136583 I 0.000
GI13831 Drosophila mojavensis FBgn0136585 I 0.000
GJ11695 Drosophila virilis FBgn0198949 I 0.000
GJ11697 Drosophila virilis FBgn0198951 I 0.000
GK12279 Drosophila willistoni FBgn0214289 I 0.000
GK12352 Drosophila willistoni FBgn0214362 I 0.000
GK12353 Drosophila willistoni FBgn0214363 I 0.000
GL15034 Drosophila persimilis FBgn0152638 I 0.000
GL15081 Drosophila persimilis FBgn0152685 I 0.000
GM24895 Drosophila sechellia FBgn0179757 I 0.000
GM25112 Drosophila sechellia FBgn0179973 I 0.000
GM25113 Drosophila sechellia FBgn0179974 I 0.000
Hba_14542 Heterorhabditis bacteriophora Hba_14542 I 0.763
HelroG98030 Helobdella robusta HelroG98030 I 0.000
HMEL012563 Heliconius melpomene HMEL012563 I 0.000
LCUP005945 Lucilia cuprina LCUP005945 I 0.000
LCUP005946 Lucilia cuprina LCUP005946 I 0.000
LCUP005947 Lucilia cuprina LCUP005947 I 0.000
MCOS_0000012101 Mesocestoides corti MCOS_0000012101 I 0.000
MDOA003812 Musca domestica MDOA003812 I 0.000
MDOA006037 Musca domestica MDOA006037 I 0.000
MDOA015287 Musca domestica MDOA015287 I 0.000
MESCA005219 Megaselia scalaris MESCA005219 I 0.000
tbx-2 Caenorhabditis elegans WBGene00006543 I 0.790
TBX2 Equus caballus ENSECAG00000024480 I 0.812
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.908
TBX6 Ochotona princeps ENSOPRG00000009784 I 0.000