Ogr16054 (Ophisaurus gracilis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Ogr16054 T341136_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX6
M05805_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX6_eDBD_HT-SELEX 		0.743 0.756
TBX6
M05806_2.00 		Homo sapiens
NTVRCACBHN
NDVGTGYBAN		 SELEX
Yin et al.(2017)
TBX6_eDBD_Methyl-HT-SELEX 		0.743 0.756
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16054 T-box 87 266

Links

Other T-box family TFs
Other Ophisaurus gracilis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TBX6 Anolis carolinensis ENSACAG00000015031 I 0.920
Pvit_12103 Pogona vitticeps Pvit_12103 I 0.915
TBX6 Homo sapiens ENSG00000149922 D 0.743
BAC20262 Xenopus laevis BAC20262 I 0.737
AAI69776 Xenopus laevis AAI69776 I 0.737
ABC75836 Xenopus laevis ABC75836 I 0.737