A0A075Q982_PATMI (Patiria miniata)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 A0A075Q982_PATMI T341165_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A0A075Q982_PATMI
M00734_2.00
Patiria miniata
NAGGTGTBAN

NTVACACCTN
PBM
Cheatle-Jarvela et al.(2014)
PmTbr
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPU_025584
M00733_2.00
Strongylocentrotus purpuratus
RGGTGTGANN

NNTCACACCY
PBM
Cheatle-Jarvela et al.(2014)
SpTbr
0.813 0.727
Tbr1
M01028_2.00
Mus musculus
DTVRCAMNYH

DRNKTGYBAH
PBM
SebePedros et al.(2013)
pTH2659
0.789 0.670
TBR1
M03560_2.00
Homo sapiens
AGGTGTGAAN

NTTCACACCT
SELEX
Jolma et al.(2013)
TBR1_1
0.789 0.670
TBR1
M03561_2.00
Homo sapiens
RAGGTGTGAAH

DTTCACACCTY
SELEX
Jolma et al.(2013)
TBR1_2
0.789 0.670
Eomes
M00215_2.00
Mus musculus
RDGTGYBANN

NNTVRCACHY
PBM
Badis et al.(2009)
Eomes_0921
0.767 0.659
EOMES
M03563_2.00
Homo sapiens
DAGGTGTGAWNNN

NNNWTCACACCTH
SELEX
Jolma et al.(2013)
EOMES_1
0.767 0.659
EOMES
M03564_2.00
Homo sapiens
TVACACNTNNNDRNGTGTGA

TCACACNYHNNNANGTGTBA
SELEX
Jolma et al.(2013)
EOMES_2
0.767 0.659
EOMES
M02752_2.00
Homo sapiens
AGGTGTGAW

WTCACACCT
SELEX
Jolma et al.(2010)
EOMES_monomer
0.767 0.659
EOMES
M05807_2.00
Homo sapiens
DAGGTGTGAN

NTCACACCTH
SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX
0.767 0.659
EOMES
M09647_2.00
Homo sapiens
ARGTGWKAAN

NTTMWCACYT
Misc
Heinz et al.(2010)
H9-Eomes_GSE26097
0.767 0.659
EOMES
M05808_2.00
Homo sapiens
NABGTGYKAH

DTMRCACVTN
SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX
0.767 0.659
For this family, TFs with SR scores > 0.734 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00734_2.00 T-box 4 180

DNA Binding Domains

Protein ID Domain From To Sequence
A0A075Q982_PATMI T-box 9 185

Links

Other T-box family TFs
Other Patiria miniata TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SPU_025584 Strongylocentrotus purpuratus SPU_025584 D 0.813
LotgiG129911 Lottia gigantea LotgiG129911 I 0.803
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.792
Tbr1 Mus musculus ENSMUSG00000035033 D 0.789
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.789
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.789
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.789
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.789
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.789
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.789
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.789
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.789
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.789
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.789
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.789
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.789
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.789
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.789
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.789
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.789
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.789
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.789
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.789
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.789
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.789
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.789
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.789
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.789
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.789
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.789
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.789
tbr1b Danio rerio ENSDARG00000004712 I 0.789
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.789
TBR1 Bos taurus ENSBTAG00000021692 I 0.789
TBR1 Canis familiaris ENSCAFG00000009984 I 0.789
TBR1 Homo sapiens ENSG00000136535 D 0.789
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.789
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.789
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.789
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.789
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.789
tbr1a Danio rerio ENSDARG00000076259 I 0.788
TBR1 Felis catus ENSFCAG00000025073 I 0.786
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.785
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.781
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.781
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.781
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.781
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.781
tbr1b Oryzias latipes ENSORLG00000016828 I 0.781
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.780
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.780
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.780
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.778
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.777
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.777
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.777
EOMES Gallus gallus ENSGALG00000027247 I 0.775
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.775
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.775
eomes Xenopus tropicalis XB-GENE-479769 I 0.775
eomes.S Xenopus laevis XB-GENE-6487182 I 0.775
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.775
EOMES Anolis carolinensis ENSACAG00000014201 I 0.775
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.774
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.773
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.773
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.773
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.772
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.772
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.770
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.770
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.770
tbx21 Danio rerio ENSDARG00000004473 I 0.769
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.768
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.767
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.767
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.767
EOMES Loxodonta africana ENSLAFG00000004142 I 0.767
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.767
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.767
EOMES Bos taurus ENSBTAG00000016920 I 0.767
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.767
EOMES Felis catus ENSFCAG00000003602 I 0.767
EOMES Canis familiaris ENSCAFG00000005510 I 0.767
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.767
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.767
Eomes Dipodomys ordii ENSDORG00000016346 I 0.767
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.767
EOMES Procavia capensis ENSPCAG00000013650 I 0.767
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.767
Eomes Mus musculus ENSMUSG00000032446 D 0.767
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.767
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.767
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.767
EOMES Equus caballus ENSECAG00000021052 I 0.767
eomesb Oryzias latipes ENSORLG00000005393 I 0.767
EOMES Homo sapiens ENSG00000163508 D 0.767
EOMES Pan troglodytes ENSPTRG00000014705 I 0.767
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.767
EOMES Cavia porcellus ENSCPOG00000004381 I 0.767
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.767
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.767
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.762
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.759
CapteG223644 Capitella teleta CapteG223644 I 0.756
eomesa Takifugu rubripes ENSTRUG00000005361 I 0.754
eomesb Gasterosteus aculeatus ENSGACG00000006345 I 0.754
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I 0.754
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I 0.754
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I 0.754
eomes.L Xenopus laevis XB-GENE-865305 I 0.753
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I 0.751
AAI66068 Xenopus tropicalis AAI66068 I 0.751
eomesa Gasterosteus aculeatus ENSGACG00000003160 I 0.751
eomesa Danio rerio ENSDARG00000006640 I 0.751
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I 0.751
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I 0.751
eomesa Oryzias latipes ENSORLG00000002320 I 0.751
ENSXMAG00000014284 Xiphophorus maculatus ENSXMAG00000014284 I 0.750
Brh_R007719 Buceros rhinoceros Brh_R007719 I 0.748
eomesb Danio rerio ENSDARG00000104243 I 0.747
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I 0.740
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.739